G1983


Basic Information

Item Value
gene id G1983
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6557606 ~ 6557845 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU2772
tagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagataggacaggacagtttatgggaacgttttaATGATCGTATCTGTAAAACCCAGATTATACAtaatgctacagctgatgccacagtggaagtgaaaaaataccacaactatgcgtttttgcccagaactcatgatcccctaacttactggaaagagagagcagtaatctttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2772 True 240 lncRNA 0.54 1 6557606 6557845

Neighbor

gene id symbol gene type direction distance location
LOC120565047 actr2,actr2a,LOC107583198,LOC104930021,LOC108423375 coding upstream 28658 6510225 ~ 6528948 (+)
LOC120569490 LOC105918390 coding upstream 179915 6338303 ~ 6377691 (+)
ppp3r1b PPP3R1,ppp3r1,ppp3r1b,LOC101071292,LOC108441257,LOC107727894,LOC106024317,LOC107699153,LOC107594412,LOC107680167 coding upstream 325007 6163406 ~ 6232599 (+)
cnrip1a cnrip1,LOC102194292,LOC107094923,LOC101465016,LOC100711692,LOC106535151,LOC104918542 coding upstream 400215 6148380 ~ 6157391 (+)
LOC120563935 NA coding upstream 411579 6132635 ~ 6146027 (+)
LOC120568096 LOC104918539,LOC100694188,LOC102198854,LOC101483894 coding downstream 33591 6591436 ~ 6659319 (+)
LOC120564833 mdha,mdh1,LOC107382285,LOC106536176 coding downstream 137739 6695584 ~ 6722958 (+)
LOC120564849 ugp2,LOC100710204,LOC101487688 coding downstream 170083 6727928 ~ 6763797 (+)
LOC120569765 NA coding downstream 239621 6797466 ~ 6797580 (+)
LOC120569778 NA coding downstream 240645 6798490 ~ 6798604 (+)
G1932 NA non-coding upstream 91220 6366489 ~ 6466386 (+)
G1936 NA non-coding upstream 164022 6393076 ~ 6393584 (+)
G1941 NA non-coding upstream 208024 6348780 ~ 6349582 (+)
G1927 NA non-coding upstream 240874 6275673 ~ 6316732 (+)
G1926 NA non-coding upstream 282096 6273836 ~ 6275510 (+)
G2230 NA non-coding downstream 24280 6582125 ~ 6582434 (+)
G2241 NA non-coding downstream 73828 6631673 ~ 6632069 (+)
G2257 NA non-coding downstream 134296 6692141 ~ 6692371 (+)
G2258 NA non-coding downstream 136067 6693912 ~ 6694211 (+)
G2260 NA non-coding downstream 166595 6724440 ~ 6724684 (+)
G1973 NA other upstream 23236 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 120389 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 154966 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 641232 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 1086197 5387393 ~ 5471409 (+)
G2530 NA other downstream 1141420 7699265 ~ 7699540 (+)
G2557 NA other downstream 1383702 7941547 ~ 7948253 (+)
G2590 NA other downstream 1531968 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 1843870 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 2059538 8617383 ~ 8643702 (+)

Expression


Co-expression Network