G184


Basic Information

Item Value
gene id G184
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 477971 ~ 481890 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU279
AAGAGGAGAGCTTCAACGTCACACTCCAGAAATGAAAGTGAAGTTTGTCAGAGTGTCAGCCACGCTGCAGTCGAGACAagactctgtttctctctgaaagaaaactcaaactgacttcatcaggtctttctcaacaacacagcagagtctctgccaaacactgATATGGCTGCTGCAAACTATCTGCCATctgaagatcagtttctgtgctccatctgtctggatttgCTCACTGATCCTGTCACCATACCATGTGGTCACAACTTCTGCAAGAACTGCATCACTGAACACTGGAATACTAGTGACCAGTACTTGTGTCCCTTATGTAATGAGGCCTTTACCACCAGACCTGATTTGAGGGTCAACACTTTGTTCTCTGAGATGGTTTCTCAGTTCAGACAGTCAGCTCAacagaaagccagcagcagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtctcctactgtgagactcacctggagcctcatctgacagcttcacgtctgaaaagacatcagctgatcgACCCTGTGGAGAACCTGGAAGGCAGGATGTGTACGGAGCACGATAAACCTC

Function

NR:

description
Retrotransposable element Tf2 protein type 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279 True 646 TUCP 0.36 2 477971 481890

Neighbor

gene id symbol gene type direction distance location
LOC120566520 NA coding upstream 4307 470745 ~ 473664 (+)
LOC120566701 NA coding upstream 15108 458378 ~ 462863 (+)
LOC120560448 NA coding upstream 24407 451976 ~ 453564 (+)
rbm34 LOC103399136,LOC103383372 coding upstream 38780 430192 ~ 439191 (+)
LOC120566531 NA coding downstream 4722 486612 ~ 494282 (+)
LOC120566458 NA coding downstream 4736 486626 ~ 555843 (+)
LOC120566597 NA coding downstream 4737 486627 ~ 509472 (+)
LOC120566389 NA coding downstream 132325 614215 ~ 619099 (+)
LOC120566319 NA coding downstream 140490 622380 ~ 1125737 (+)
G55 NA non-coding upstream 67509 409741 ~ 410462 (+)
G50 LOC104942424 non-coding upstream 91323 370651 ~ 386648 (+)
G49 NA non-coding upstream 108674 369028 ~ 369297 (+)
G48 NA non-coding upstream 132064 345628 ~ 345907 (+)
G36 NA non-coding upstream 163942 313130 ~ 314029 (+)
G221 NA non-coding downstream 40642 522532 ~ 522989 (+)
G261 NA non-coding downstream 204555 686445 ~ 692229 (+)
G270 LOC103372508 non-coding downstream 326671 808561 ~ 811947 (+)
G195 NA non-coding downstream 403217 885107 ~ 1195250 (+)
LOC120566926 NA non-coding downstream 409731 891621 ~ 892123 (+)
rrp36 rrp36 other upstream 157192 291233 ~ 320779 (+)
fbxo3 NA other upstream 240232 70004 ~ 237739 (+)
LOC120560073 LOC103372506,LOC102203670,LOC101482513,LOC102296948 other upstream 253375 200413 ~ 224596 (+)
LOC120560058 NA other upstream 295668 158391 ~ 182303 (+)
G11 NA other upstream 404302 23490 ~ 73669 (+)
G176 LOC104946033 other downstream 101500 583390 ~ 598207 (+)
LOC120566394 NA other downstream 226263 708153 ~ 753762 (+)
LOC120566368 NA other downstream 425950 907840 ~ 1012869 (+)
LOC120566414 LOC104946033 other downstream 444416 926306 ~ 1011615 (+)
G199 NA other downstream 535017 1016907 ~ 1019038 (+)

Expression


Co-expression Network