LOC120566394


Basic Information

Item Value
gene id LOC120566394
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 708153 ~ 753762 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU299
CTTTAGAAACTGATTTCTTCTGGAAGTTATAATAAATGTCTGTGGGTTTAACAGAGGTTTAAATAGATATCGTCCACATAACGTATGTCATGATGCATCAAATGAATGTGatacacattcatttttatttgatgtgCAGCCAcagaaaagctgaatatttcattTTGTCATTAAGCTTCATTTAAGAGTAAGGCCTATTACATCCCatagtgtctacagaacacagtatgtgttgttgttgttgttgttgttataccGGGTATAAAAAGTTAATGGATGTTTCTATGTTCTGTGAAAAGTGTATAGGATAATTACTGGTCACTTTGgccatttctttatttctttcgtGAATTCTGTAAGATGGTTTATGAGTCAAAGAAATCTGTAAAT
>XM_039812804.1
TGaacacagacagcagcagcatctgtCAGTGTCTGCTGATGAAGGTACCACGTCTCTTTGACCTCATCTGAACGGGACTTTAACAGCGGAGCAGCCTGACAGCAGGAAGCCACAATGACGGCAGTGGGCCTTCTCAACACTTTGGAGGATTTAAAAGAAGAGGAATTTAAGAAATTCAAATGGCATCTGCAGCAAGACATCCTGGACGGCTACCAAAGCATCAAAGTGTCCAAGTTGGAGAACGTAGAAAGGCAGGACACGGTGGATGTGATGGTGAAAACCTATCAACATCAAGGAGCTCTGAAGGTGACCAAGAAGGTTTTAGAGAAGATCAACAGGAATGATCTGGTGCAGAGTCTTCCAGACACCAGCTCAGGACCAGAAGTTATGGCTGCTGCCAGCAATGCGCCATCTGAAGAAGTGtccaaaccaggagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtctcctactgtgagactcacctggagcctcatctgaCCATGTCAGGCctgaaaagacatcagctgatcgACCCTGTGGAGAATCTGGAAGGCAGGATGTGTACAGAGCACGATAAAcctctggagctgttctgtaagaccgaccagacatgtgtctgcatgctctgcACTGTTTTAGATCATAAGACGCATGATGTTGTTCCTCTGACAGAAGGATATGAAGGAAAGAAGGCAGAGCTCGGGAAGACAGAGGCTGaaattcagaagatgatccagaagagacgaCTGAAGATTCAGGGGATCAAACACTCAGTCGAcctcagtgaggaagatgcagacagagagatagcagaaggtgttcaggtcttcacttctctgaaggagtctgttgagagaggcctgaatgagctcatcaacaccatcaaagagaagcagaaaacaaaagaaaaacaggccgaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagagaagcactgaggtggagcagGTGTTACGCTCTGAAGaccacctccatcttctccagagtGTCCAGTCCCTAAAGATCCAACAACCTCCACCCACCAAGGACTGGACAGAGGTCAGCGTCCGTCCATCATCATATGAGGGGACTGTGGTGAGAGCTGTGGTtcagctggaggagacactCAGTAAAGAGATGAAGAAACTGATTGAAGCCGAGCTGAAGAGGGTccagcagtatgcagtggatgtgactcttgatcctgatacagcaTTTCCTAATCTCACCCTATCTGGTGATGGGAAACAAGTAATTGATAGTTATATGAGGAAGAATCTCCCAGACAACCCAGAGAGATTTtctaagtgtgtttgtgttttaggaAAGCAGAGTTTCTCTTCAGGCAGATTTTACTGTGAGGTTCAAGTTAAAGGAAAGACTAACTGGGATTTAGGAGTGGTCAGAGAGTCGATCAACAGGAAGGAAATAATCACAATGAGCCCTGAGGATGGTTACTGGACGATATGGTTGAGAAATGGAAATAAGTACAAAGCTAATGCTGTCCCTCcagtccttctctctctgaagtctcctcctcagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgacgtagatgctgcagctcttatctcctcctttactggctgctccttcactgagaaactcttcccATACTTCAGTCCCTGTTGTGATGATGGTGGTAAAAACTCTGCCCCTCTGATCATCTCCCCTGTCAGAGTAAACTATTTCAGGTATTAATTTTTAATCAAGGGAACAAATGTACATATCatatttatatagtttttttaatatattttttatattttgttttcctaaggattattatttttctccgCCTAAAAGTGATGCTACAGTCTAAACCGTATATGGTGGAGCAGAGAAAACGTGTTTAGCCTTATAACTCCCAAACCGTACATCGCAaattaaaaatacacatttcaacGCTTTCCCTGAATTTAGCTGAATCTCCTGATTTAGGCACCGCCCATTTCCACCTATACTTTTATGCGCAAAAAATTTTGATTTATCCTAAACCTACTTTTTCCAACTCCTCCAAGACTGTGACAACGATCTGCACAAAACTTGGTTCGTAGCATCTCCAtaccgacctgacaaaaagttatcaaaataatttttatCTAATGAAACAAATTGCGCAAATtacgcacaaacaaatttgtgtagcttgCTACAAAAACACGAACTTTGCCATTTCTTggtcaaaataaatgctattaaagccaaactttagattcttgtttgccatTACCCTCTGGGGCTCAATGCATGTAAATGGGACATTTGTGATTGCAATTTCTCTGCCGTGGTAATGGCTATCAACACGAAACTTGTGATGCTTGTtcggcatgccgctctgaggctctgtaccaaatttggcgaagatcggccattagggggcgctatagtcaaCATAGACCAGTTTTGGCCCTTTTACTCAATAAATGTTAATAGGATATTTTCAACGGCAACGTACCGCAGACCATGCGGCTCACACCTCTCGATATTTGCATTTCGATTTACGTTTTCCTCTCCACCATTACGCTTTGGGACCCACTTTCACGTGCTCCCTGGGTCGTCTGGGGCCGTCATAACTGAAGCAGTTCTAGTTCCATTTATTATCATATGGTTAAATGTGCAGCAATTCGTTGCAAATTGAATCAAACTTCATCTTGACATATTTGGTGTCTTCAGAAACTGATTTCTTCTAGAAGTTTAAATGAATGTCTGTGGGTTTAACAGAGGTTTAAATAGATATCGTCCACATAACGTATGTCATGATGCATCAAATGAATGTGatacacattcatttttatttgatgtgCAGCCAcagaaaagctgaatatttcattTTGTCATTAAGCTTCATTTAAGAGTAAGGCCTATTACATCCCatagtgtctacagaacacagtatgtgttgttgttgttgttgttgttataccGGGTATAAAAAGTTAATGGATGTTTCTATGTTCTGTGAAAAGTGTATAGGATAATTACTGGTCACTTTGgccatttctttatttctttcgtGAATTCTGTAAGATGGTTTATGAGTCAAAGAAATCTGTAAATATGTGATTGTAGAATAATAACAAATAAAGCAGTTGTTAAACA
>XM_039812813.1
TGaacacagacagcagcagcatctgtCAGTGTCTGCTGATGAAGGTACCACGTCTCTTTGACCTCATCTGAACGGGACTTTAACAGCGGAGCAGCCTGACAGGAAGCCACAATGACGGCAGTGGGCCTTCTCAACACTTTGGAGGATTTAAAAGAAGAGGAATTTAAGAAATTCAAATGGCATCTGCAGCAAGACATCCTGGACGGCTACCAAAGCATCAAAGTGTCCAAGTTGGAGAACGTAGAAAGGCAGGACACGGTGGATGTGATGGTGAAAACCTATCAACATCAAGGAGCTCTGAAGGTGACCAAGAAGGTTTTAGAGAAGATCAACAGGAATGATCTGGTGCAGAGTCTTCCAGACACCAGCTCAGGACCAGAAGTTATGGCTGCTGCCAGCAATGCGCCATCTGAAGAAGTGtccaaaccaggagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtctcctactgtgagactcacctggagcctcatctgaCCATGTCAGGCctgaaaagacatcagctgatcgACCCTGTGGAGAATCTGGAAGGCAGGATGTGTACAGAGCACGATAAAcctctggagctgttctgtaagaccgaccagacatgtgtctgcatgctctgcACTGTTTTAGATCATAAGACGCATGATGTTGTTCCTCTGACAGAAGGATATGAAGGAAAGAAGGCAGAGCTCGGGAAGACAGAGGCTGaaattcagaagatgatccagaagagacgaCTGAAGATTCAGGGGATCAAACACTCAGTCGAcctcagtgaggaagatgcagacagagagatagcagaaggtgttcaggtcttcacttctctgaaggagtctgttgagagaggcctgaatgagctcatcaacaccatcaaagagaagcagaaaacaaaagaaaaacaggccgaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagagaagcactgaggtggagcagGTGTTACGCTCTGAAGaccacctccatcttctccagagtGTCCAGTCCCTAAAGATCCAACAACCTCCACCCACCAAGGACTGGACAGAGGTCAGCGTCCGTCCATCATCATATGAGGGGACTGTGGTGAGAGCTGTGGTtcagctggaggagacactCAGTAAAGAGATGAAGAAACTGATTGAAGCCGAGCTGAAGAGGGTccagcagtatgcagtggatgtgactcttgatcctgatacagcaTTTCCTAATCTCACCCTATCTGGTGATGGGAAACAAGTAATTGATAGTTATATGAGGAAGAATCTCCCAGACAACCCAGAGAGATTTtctaagtgtgtttgtgttttaggaAAGCAGAGTTTCTCTTCAGGCAGATTTTACTGTGAGGTTCAAGTTAAAGGAAAGACTAACTGGGATTTAGGAGTGGTCAGAGAGTCGATCAACAGGAAGGAAATAATCACAATGAGCCCTGAGGATGGTTACTGGACGATATGGTTGAGAAATGGAAATAAGTACAAAGCTAATGCTGTCCCTCcagtccttctctctctgaagtctcctcctcagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgacgtagatgctgcagctcttatctcctcctttactggctgctccttcactgagaaactcttcccATACTTCAGTCCCTGTTGTGATGATGGTGGTAAAAACTCTGCCCCTCTGATCATCTCCCCTGTCAGAGTAAACTATTTCAGGTATTAATTTTTAATCAAGGGAACAAATGTACATATCatatttatatagtttttttaatatattttttatattttgttttcctaaggattattatttttctccgCCTAAAAGTGATGCTACAGTCTAAACCGTATATGGTGGAGCAGAGAAAACGTGTTTAGCCTTATAACTCCCAAACCGTACATCGCAaattaaaaatacacatttcaacGCTTTCCCTGAATTTAGCTGAATCTCCTGATTTAGGCACCGCCCATTTCCACCTATACTTTTATGCGCAAAAAATTTTGATTTATCCTAAACCTACTTTTTCCAACTCCTCCAAGACTGTGACAACGATCTGCACAAAACTTGGTTCGTAGCATCTCCAtaccgacctgacaaaaagttatcaaaataatttttatCTAATGAAACAAATTGCGCAAATtacgcacaaacaaatttgtgtagcttgCTACAAAAACACGAACTTTGCCATTTCTTggtcaaaataaatgctattaaagccaaactttagattcttgtttgccatTACCCTCTGGGGCTCAATGCATGTAAATGGGACATTTGTGATTGCAATTTCTCTGCCGTGGTAATGGCTATCAACACGAAACTTGTGATGCTTGTtcggcatgccgctctgaggctctgtaccaaatttggcgaagatcggccattagggggcgctatagtcaaCATAGACCAGTTTTGGCCCTTTTACTCAATAAATGTTAATAGGATATTTTCAACGGCAACGTACCGCAGACCATGCGGCTCACACCTCTCGATATTTGCATTTCGATTTACGTTTTCCTCTCCACCATTACGCTTTGGGACCCACTTTCACGTGCTCCCTGGGTCGTCTGGGGCCGTCATAACTGAAGCAGTTCTAGTTCCATTTATTATCATATGGTTAAATGTGCAGCAATTCGTTGCAAATTGAATCAAACTTCATCTTGACATATTTGGTGTCTTCAGAAACTGATTTCTTCTAGAAGTTTAAATGAATGTCTGTGGGTTTAACAGAGGTTTAAATAGATATCGTCCACATAACGTATGTCATGATGCATCAAATGAATGTGatacacattcatttttatttgatgtgCAGCCAcagaaaagctgaatatttcattTTGTCATTAAGCTTCATTTAAGAGTAAGGCCTATTACATCCCatagtgtctacagaacacagtatgtgttgttgttgttgttgttgttataccGGGTATAAAAAGTTAATGGATGTTTCTATGTTCTGTGAAAAGTGTATAGGATAATTACTGGTCACTTTGgccatttctttatttctttcgtGAATTCTGTAAGATGGTTTATGAGTCAAAGAAATCTGTAAATATGTGATTGTAGAATAATAACAAATAAAGCAGTTGTTAAACA

Function

GO: NA

KEGG:

id description
ko04391 Hippo signaling pathway - fly

RNA

RNA id representative length rna type GC content exon number start site end site
TU299 False 390 lncRNA 0.43 2 708153 753720
XM_039812804.1 True 3201 mRNA 0.43 3 743117 753762
XM_039812813.1 False 3198 mRNA 0.43 3 743117 753762

Neighbor

gene id symbol gene type direction distance location
LOC120566437 NA coding upstream 12038 691340 ~ 696115 (+)
LOC120566792 NA coding upstream 27342 678822 ~ 680811 (+)
LOC120566787 LOC104946033 coding upstream 29397 647212 ~ 678756 (+)
LOC120566643 NA coding upstream 38985 664328 ~ 669168 (+)
LOC120566631 NA coding upstream 69146 622385 ~ 639007 (+)
LOC120566682 NA coding downstream 2663 756425 ~ 773725 (+)
LOC120566718 NA coding downstream 34340 788102 ~ 791905 (+)
LOC120566870 NA coding downstream 86900 840662 ~ 858533 (+)
LOC120566581 NA coding downstream 220043 973805 ~ 984586 (+)
LOC120566725 NA coding downstream 312936 1066698 ~ 1072641 (+)
G261 NA non-coding upstream 15924 686445 ~ 692229 (+)
G221 NA non-coding upstream 185164 522532 ~ 522989 (+)
G55 NA non-coding upstream 297691 409741 ~ 410462 (+)
G50 LOC104942424 non-coding upstream 321505 370651 ~ 386648 (+)
G49 NA non-coding upstream 338856 369028 ~ 369297 (+)
G270 LOC103372508 non-coding downstream 54799 808561 ~ 811947 (+)
G195 NA non-coding downstream 131345 885107 ~ 1195250 (+)
LOC120566926 NA non-coding downstream 137859 891621 ~ 892123 (+)
G281 NA non-coding downstream 213568 967330 ~ 968520 (+)
LOC120566887 NA non-coding downstream 548951 1302713 ~ 1303535 (+)
G176 LOC104946033 other upstream 109946 583390 ~ 598207 (+)
G184 NA other upstream 226263 477971 ~ 481890 (+)
rrp36 rrp36 other upstream 387374 291233 ~ 320779 (+)
fbxo3 NA other upstream 470414 70004 ~ 237739 (+)
LOC120566368 NA other downstream 154078 907840 ~ 1012869 (+)
LOC120566414 LOC104946033 other downstream 172544 926306 ~ 1011615 (+)
G199 NA other downstream 263145 1016907 ~ 1019038 (+)
G292 NA other downstream 362862 1116624 ~ 1144413 (+)
G165 NA other downstream 390892 1144654 ~ 1158559 (+)

Expression


Co-expression Network