G2180


Basic Information

Item Value
gene id G2180
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6276954 ~ 6316733 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3057
ggtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgcgtgtg
>TU3058
ggtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtctgggtgtgtgtgtgtgtgtgtctgggtgtgtgtctgggtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtccgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgatgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3057 False 220 lncRNA 0.48 2 6303723 6316733
TU3058 True 552 lncRNA 0.42 4 6276954 6316733

Neighbor

gene id symbol gene type direction distance location
LOC120563932 NA coding downstream 60473 6213667 ~ 6216481 (-)
LOC120563881 NA coding downstream 63354 6208778 ~ 6213600 (-)
LOC120563858 NA coding downstream 78719 6183835 ~ 6198235 (-)
aplf NA coding downstream 157420 6065192 ~ 6119534 (-)
LOC120563841 NA coding downstream 228565 6042226 ~ 6048389 (-)
LOC120573968 LOC103383287,LOC103375385,LOC108228344,LOC101483597,LOC101070538,LOC106535156,LOC105919311 coding upstream 150406 6467139 ~ 6475893 (-)
LOC120574130 NA coding upstream 160232 6476965 ~ 6482370 (-)
LOC120574175 NA coding upstream 171287 6488020 ~ 6491799 (-)
LOC120574032 NA coding upstream 177837 6494570 ~ 6507444 (-)
LOC120569774 NA coding upstream 447807 6764540 ~ 6764654 (-)
G2152 NA non-coding downstream 38721 6136327 ~ 6238233 (-)
G2092 NA non-coding downstream 55089 6217152 ~ 6221865 (-)
G2160 NA non-coding downstream 113342 6163254 ~ 6163612 (-)
G2158 NA non-coding downstream 117223 6159154 ~ 6159731 (-)
G2147 NA non-coding downstream 118239 6116497 ~ 6158715 (-)
G2184 NA non-coding upstream 6976 6323709 ~ 6381968 (-)
G2194 NA non-coding upstream 40354 6357087 ~ 6367016 (-)
G2196 NA non-coding upstream 55584 6372317 ~ 6372937 (-)
G2185 NA non-coding upstream 76320 6393053 ~ 6393631 (-)
G2222 NA non-coding upstream 211933 6528666 ~ 6548809 (-)
G2177 NA other downstream 9716 6266606 ~ 6267238 (-)
LOC120563747 LOC104946033 other downstream 70064 6200947 ~ 6206890 (-)
G2146 NA other downstream 165362 6111139 ~ 6111592 (-)
LOC120563692 NA other downstream 539968 5731439 ~ 5736986 (-)
LOC120563672 esf1,LOC108229506 other downstream 776961 5476545 ~ 5499993 (-)
G2219 NA other upstream 204773 6521506 ~ 6534443 (-)
spred2a spred2 other upstream 223909 6540642 ~ 6581598 (-)
vps54 vps54 other upstream 492019 6808752 ~ 6876237 (-)
LOC120565104 peli1,LOC103372217,LOC100709940,LOC102294912,LOC101486541,LOC108247092,LOC107382286 other upstream 572555 6889288 ~ 6938987 (-)
LOC120571633 otx1,LOC102233826 other upstream 682438 6999171 ~ 7017659 (-)

Expression


Co-expression Network