G2260


Basic Information

Item Value
gene id G2260
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6724440 ~ 6724684 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3178
GATGGACGACCACAACCTGGCCtcctccgtctgtctgtctgtctgtctgtctgtctgtaagacACTGAGAGAATGTCTCTGTCGTTAGATGATAGCACGCTAGCTGTCCAGAAACTGTTTTCGGAAAACATGTTATCACCAATAAAACATCGTTGAAACTGACCCACCACAAATCAGTTCTCCTTTCTTTGATGTTCACAAGTCTCGTTATTGGGGCGACCTCCAGCTCGCCCAGTAAggtgccc

Function

GO:

id name namespace
GO:1902600 proton transmembrane transport biological_process
GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient biological_process

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU3178 True 245 lncRNA 0.60 1 6724440 6724684

Neighbor

gene id symbol gene type direction distance location
LOC120564833 mdha,mdh1,LOC107382285,LOC106536176 coding upstream 1482 6695584 ~ 6722958 (+)
LOC120568096 LOC104918539,LOC100694188,LOC102198854,LOC101483894 coding upstream 65121 6591436 ~ 6659319 (+)
LOC120565047 actr2,actr2a,LOC107583198,LOC104930021,LOC108423375 coding upstream 195492 6510225 ~ 6528948 (+)
LOC120569490 LOC105918390 coding upstream 346749 6338303 ~ 6377691 (+)
ppp3r1b PPP3R1,ppp3r1,ppp3r1b,LOC101071292,LOC108441257,LOC107727894,LOC106024317,LOC107699153,LOC107594412,LOC107680167 coding upstream 491841 6163406 ~ 6232599 (+)
LOC120564849 ugp2,LOC100710204,LOC101487688 coding downstream 3244 6727928 ~ 6763797 (+)
LOC120569765 NA coding downstream 72782 6797466 ~ 6797580 (+)
LOC120569778 NA coding downstream 73806 6798490 ~ 6798604 (+)
LOC120569812 NA coding downstream 74891 6799575 ~ 6799688 (+)
LOC120569789 NA coding downstream 76718 6801402 ~ 6801516 (+)
G2258 NA non-coding upstream 30229 6693912 ~ 6694211 (+)
G2257 NA non-coding upstream 32069 6692141 ~ 6692371 (+)
G2241 NA non-coding upstream 92371 6631673 ~ 6632069 (+)
G2230 NA non-coding upstream 142006 6582125 ~ 6582434 (+)
G1983 NA non-coding upstream 166595 6557606 ~ 6557845 (+)
G2264 NA non-coding downstream 7431 6732115 ~ 6732673 (+)
G2267 NA non-coding downstream 29845 6754529 ~ 6755739 (+)
G2263 NA non-coding downstream 46671 6771355 ~ 6775250 (+)
G2268 NA non-coding downstream 50138 6774822 ~ 6782912 (+)
G2272 NA non-coding downstream 83120 6807804 ~ 6808666 (+)
G1973 NA other upstream 190070 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 287223 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 321800 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 808066 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 1253031 5387393 ~ 5471409 (+)
G2530 NA other downstream 974581 7699265 ~ 7699540 (+)
G2557 NA other downstream 1216863 7941547 ~ 7948253 (+)
G2590 NA other downstream 1365129 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 1677031 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 1892699 8617383 ~ 8643702 (+)

Expression


Co-expression Network