G2263


Basic Information

Item Value
gene id G2263
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6771355 ~ 6775250 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3182
GTTCCTCTCCACGGAAATCTTTAGTAAAAGGCGAAAGATTTatacgatctgaagagaaacaaGAGTGTATTGGAGTGTTGCTGTGAAGTGACCGACCAGATTCTCCGCCTCATGTTCCTCACTTATGGTCCAGTACCTGAGTACCTGAGCTTTTCTGGGGGTGGGGGGCTCCTAAGACTTTGTGCTAGGGAGAAGCGTATACTATGTGCTTATAGTGTCACCTATACATGCTTATTTGGTTTACGTTATGTTTCCTTGAATGTTATGGTCACTATGTCaccttttcttgatttttgtctgggtaTGTGGTGATGACGAAAGGTAGGTTCGGGGGGCGTGTTCATGTTATAAATGGTGTTGTATATATACcgttaaaaatgaataaaacttgTATTCATAAGAACTATCAAagttacttttagttaactTAACTGTTAAGGCC

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG:

id description
ko00630 Glyoxylate and dicarboxylate metabolism
ko00140 Steroid hormone biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU3182 True 442 lncRNA 0.51 2 6771355 6775250

Neighbor

gene id symbol gene type direction distance location
LOC120564849 ugp2,LOC100710204,LOC101487688 coding upstream 7558 6727928 ~ 6763797 (+)
LOC120564833 mdha,mdh1,LOC107382285,LOC106536176 coding upstream 48397 6695584 ~ 6722958 (+)
LOC120568096 LOC104918539,LOC100694188,LOC102198854,LOC101483894 coding upstream 112036 6591436 ~ 6659319 (+)
LOC120565047 actr2,actr2a,LOC107583198,LOC104930021,LOC108423375 coding upstream 242407 6510225 ~ 6528948 (+)
LOC120569490 LOC105918390 coding upstream 393664 6338303 ~ 6377691 (+)
LOC120569765 NA coding downstream 22216 6797466 ~ 6797580 (+)
LOC120569778 NA coding downstream 23240 6798490 ~ 6798604 (+)
LOC120569812 NA coding downstream 24325 6799575 ~ 6799688 (+)
LOC120569789 NA coding downstream 26152 6801402 ~ 6801516 (+)
LOC120569727 NA coding downstream 26755 6802005 ~ 6802119 (+)
G2267 NA non-coding upstream 15616 6754529 ~ 6755739 (+)
G2264 NA non-coding upstream 38682 6732115 ~ 6732673 (+)
G2260 NA non-coding upstream 46671 6724440 ~ 6724684 (+)
G2258 NA non-coding upstream 77144 6693912 ~ 6694211 (+)
G2257 NA non-coding upstream 78984 6692141 ~ 6692371 (+)
G2272 NA non-coding downstream 32554 6807804 ~ 6808666 (+)
G2274 NA non-coding downstream 35500 6810750 ~ 6811453 (+)
G2276 NA non-coding downstream 39758 6815008 ~ 6815992 (+)
G2278 NA non-coding downstream 49114 6824364 ~ 6824564 (+)
G2279 NA non-coding downstream 53142 6828392 ~ 6828667 (+)
G1973 NA other upstream 236985 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 334138 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 368715 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 854981 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 1299946 5387393 ~ 5471409 (+)
G2530 NA other downstream 924015 7699265 ~ 7699540 (+)
G2557 NA other downstream 1166297 7941547 ~ 7948253 (+)
G2590 NA other downstream 1314563 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 1626465 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 1842133 8617383 ~ 8643702 (+)

Expression


Co-expression Network