G2272


Basic Information

Item Value
gene id G2272
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6807804 ~ 6808666 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3192
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgtacatgtgtgtgtgtgtgtgtgtgtgtgtgttgtacatgAACAAAAAGTGCCGGAAGCatagagacatttttttttgaaaaaaatgtgtccCATCTTCTTTAtccgggaggacaacacaagggttaacgaGCAGTAATACATCACGTTGTGCAGGCTCGTTGCTCCTGATTTAAAAAGAACAGCGAGAGGAAGATCTCatgtagatatttagaaaataaaaatcagattTTCTGTTCCGTTTTTTGAGTCGTTTCAGcttcagatgaaaccaaaaagcTCTCGCTCTGGTCATGCAGATTAAATAAAACTACAGTAGGAGGGAGGACAGCAGTTTGAGTTAACAGCTGATTTTTCATGCTTCACGTTCTGCGATTAACTACGCGTAGAAAATTACCTTCGTCTCAGGATCACACCTCGAGAAAACTTAATGCATAATtggacagtttaaaaaaaaaaagtgtaaatgaagagtgttttttttttttgaagagtTGGGATGCTTTCACAGTGTGGatgtttgtttaaaggtcccatgacatggtgctctttggatgcttttatatagaccttagtggtcccctaatactgtatctgaagtctctttcctgaaattcagccttggtgcagaattacagccactagagccagtaaCCTTGCACcatatgacctcataaggagaaggttcctgattggtccatctgagctttcatttcctcaaaggcagagcaggatacccagggctcggtttacacctatcaccatttctaaccactgggggaccataggcaggctgggggggaactcatattaatgttaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3192 True 863 lncRNA 0.59 1 6807804 6808666

Neighbor

gene id symbol gene type direction distance location
LOC120569727 NA coding upstream 5685 6802005 ~ 6802119 (+)
LOC120569789 NA coding upstream 6288 6801402 ~ 6801516 (+)
LOC120569812 NA coding upstream 8116 6799575 ~ 6799688 (+)
LOC120569778 NA coding upstream 9200 6798490 ~ 6798604 (+)
LOC120569765 NA coding upstream 10224 6797466 ~ 6797580 (+)
trnae-uuc_10 NA coding downstream 357930 7166596 ~ 7166667 (+)
trnae-uuc_11 NA coding downstream 358436 7167102 ~ 7167173 (+)
trnae-uuc_12 NA coding downstream 358954 7167620 ~ 7167691 (+)
trnae-uuc_13 NA coding downstream 359466 7168132 ~ 7168203 (+)
trnae-uuc_14 NA coding downstream 361719 7170385 ~ 7170456 (+)
G2268 NA non-coding upstream 24892 6774822 ~ 6782912 (+)
G2263 NA non-coding upstream 32554 6771355 ~ 6775250 (+)
G2267 NA non-coding upstream 52065 6754529 ~ 6755739 (+)
G2264 NA non-coding upstream 75131 6732115 ~ 6732673 (+)
G2260 NA non-coding upstream 83120 6724440 ~ 6724684 (+)
G2274 NA non-coding downstream 2084 6810750 ~ 6811453 (+)
G2276 NA non-coding downstream 6342 6815008 ~ 6815992 (+)
G2278 NA non-coding downstream 15698 6824364 ~ 6824564 (+)
G2279 NA non-coding downstream 19726 6828392 ~ 6828667 (+)
G2281 NA non-coding downstream 43946 6852612 ~ 6852897 (+)
G1973 NA other upstream 273434 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 370587 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 405164 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 891430 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 1336395 5387393 ~ 5471409 (+)
G2530 NA other downstream 890599 7699265 ~ 7699540 (+)
G2557 NA other downstream 1132881 7941547 ~ 7948253 (+)
G2590 NA other downstream 1281147 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 1593049 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 1808717 8617383 ~ 8643702 (+)

Expression


Co-expression Network