G2278


Basic Information

Item Value
gene id G2278
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6824364 ~ 6824564 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3198
ctaaggtctatataaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattagggaaccactaaggcctatataaaagagacttcagatacagtattagggaaccactaaggcctatataaaagagacttcagatacagtattagggaaccactaaggcctatataaaag

Function

GO:

id name namespace
GO:1901607 alpha-amino acid biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3198 True 201 lncRNA 0.47 1 6824364 6824564

Neighbor

gene id symbol gene type direction distance location
LOC120569727 NA coding upstream 22245 6802005 ~ 6802119 (+)
LOC120569789 NA coding upstream 22848 6801402 ~ 6801516 (+)
LOC120569812 NA coding upstream 24676 6799575 ~ 6799688 (+)
LOC120569778 NA coding upstream 25760 6798490 ~ 6798604 (+)
LOC120569765 NA coding upstream 26784 6797466 ~ 6797580 (+)
trnae-uuc_10 NA coding downstream 342032 7166596 ~ 7166667 (+)
trnae-uuc_11 NA coding downstream 342538 7167102 ~ 7167173 (+)
trnae-uuc_12 NA coding downstream 343056 7167620 ~ 7167691 (+)
trnae-uuc_13 NA coding downstream 343568 7168132 ~ 7168203 (+)
trnae-uuc_14 NA coding downstream 345821 7170385 ~ 7170456 (+)
G2276 NA non-coding upstream 8372 6815008 ~ 6815992 (+)
G2274 NA non-coding upstream 12911 6810750 ~ 6811453 (+)
G2272 NA non-coding upstream 15698 6807804 ~ 6808666 (+)
G2268 NA non-coding upstream 41452 6774822 ~ 6782912 (+)
G2263 NA non-coding upstream 49114 6771355 ~ 6775250 (+)
G2279 NA non-coding downstream 3828 6828392 ~ 6828667 (+)
G2281 NA non-coding downstream 28048 6852612 ~ 6852897 (+)
G2273 NA non-coding downstream 32578 6857142 ~ 6859587 (+)
G2324 NA non-coding downstream 57398 6881962 ~ 6882434 (+)
G2325 NA non-coding downstream 58790 6883354 ~ 6884904 (+)
G1973 NA other upstream 289994 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 387147 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 421724 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 907990 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 1352955 5387393 ~ 5471409 (+)
G2530 NA other downstream 874701 7699265 ~ 7699540 (+)
G2557 NA other downstream 1116983 7941547 ~ 7948253 (+)
G2590 NA other downstream 1265249 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 1577151 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 1792819 8617383 ~ 8643702 (+)

Expression


Co-expression Network