G2292


Basic Information

Item Value
gene id G2292
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6804856 ~ 6807094 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3214
tttaaaaagcagaaatatgctataaaattgaataaaacacccaaaattgtaatgaaagtagtgaactgatccttcattttacttgagaagAGCGTTAAATGGAACCATCCGTGTTCATTTTTTggcaatttggttaaaagaaaccccaaatttctgacacaggagagacaacaggagggttaatcaAATCACCGACCTTGTTCAGGCTCTCGGGGGCGCAAAAAACTGCCGTTTCAAGCTATCAAAAGTCAGATTTTCTGTTCCTGAGTCAAGTTGAAGTTTTTTTTGAGCTCCGACTAAATACGAAACACATCTGTCCAGCTGCGGGTCACATCACCTTCGGTCTCTGAAGCCTACGTCAACACTACAGGCAGCGTTTAGCTCCCAAAATATACGCAAGGAAACTAGACGGGGCTGAAACTAACCGCTATCTTCACTGTGGGttattattttctggatgaacgGATGAGccgtttggtctctaaaatgtagggttgggtatcgtttgggttttttccgataccggtgctaaaacgacaTTTTAAAACTGTGCCGGTGCCATACTTAAAAAATAGggaatagggtattttacaataactttgaatgcaccacgaggcttactagtttcatgtgaacgcaccgtctatgttgtttttctgacaccgGCAGCTGCACACTGCTTAACGTCCTGATGTttgaatcctctccagtgaaatacagacaaccTTTACatcgtttagctgtcagcattttaacagtgtttactccagctgctagctaacggttggctaacgttacctgctgtcaagtgagGTGACATTTAGCTCCCAAATTTAGCTCCCAAAATACACGCAAGGAAACTAGAGAGGGCTGCAGCTAATAACTATCTTcactgtggattattttctggatgaactGATGTCTCTAaaatgtagggttgggtatcgtttgggatTTTTCCGATatcggtgcctgaaccgatacttaaaataaaatggggtaatagggtattttacaataactttgaatgcaccacgaggcttactagtttcaagtgaacgcaccgtctggtGTTTTTCTGACAACGGCAGCGGCACGCTGCTTAACGTACCAATGTttgaatcctctccagtgaaatacagtcaccctttacaccgtttagctgttttaacagtgtttaatccagctgctagctaacggtaggctaacgttacttgctgtcaggtgtagcgttaactagctaacggtaggctaacgttacttgctgtcaggtgtagtgttaactagctaacggtaggctaacgttacttgctgtCAGgtgtagcgttaactagctaacggtaggctaacgttacctgctgtcaggtgtagtgttaactagcgtcacgtgcagcgatgctcctgttgcctctaacgtctgtttcagagcatcagagagcagcgcagaagGCATTTGAttggcaccaaaatctgcgttttgattcggtccggtagataccggtcgcttaggcaccggtgccgtattagcgccgggtttcggtacccaaccctactaaaatgtaagaaaatggtgaaaaatgtggatcggtgtttccccaaaaaagcccaagacgatgtcctcaaatgtctcgtttagtccacaactcaaaaatattcagtttcccgtcacagaggagagaagacactagaacaacattcacatttaacaagctgacatctgagacattttgacttttcatgaaaaattactcaaacagaTTCATCGATTATCAAAACAGTCGCCGATTAATTTAACCCTTGAGTCGTCCACcctgaacttgttgtccttcaggGTCAAAattggcactttttttttttattcatggtcaataaaccagtggtgtagtctacgtgatacgcagtatatacccactaagaaagctccaggatttccatatacccacttaaaaatacCCAATGACCCACAACAACATACTtaacattatatttttgatatattttgaattgtcatctgtttttcttcttcacataggctaaataaagggatttccactgtaaattggtgcataaaagtgtatcagaatacaggaaatgaagtcgttgatgctcaaaacttccctgggggaggacacccagaccccccactatgata

Function

NR:

description
PREDICTED: protocadherin Fat 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3214 True 2152 lncRNA 0.41 3 6804856 6807094

Neighbor

gene id symbol gene type direction distance location
LOC120569746 NA coding downstream 9248 6795494 ~ 6795608 (-)
LOC120569800 NA coding downstream 10140 6794604 ~ 6794716 (-)
LOC120569742 NA coding downstream 10650 6794092 ~ 6794206 (-)
LOC120569795 NA coding downstream 11537 6793207 ~ 6793319 (-)
LOC120569752 NA coding downstream 12051 6792691 ~ 6792805 (-)
zgc:66455 NA coding upstream 333640 7140734 ~ 7155323 (-)
b3gnt2a NA coding upstream 351776 7158870 ~ 7223862 (-)
LOC120565981 NA coding upstream 434726 7241820 ~ 7246413 (-)
LOC120562943 NA coding upstream 442487 7249581 ~ 7255345 (-)
LOC120565143 NA coding upstream 485453 7292547 ~ 7307876 (-)
G2289 NA non-coding downstream 102 6803930 ~ 6804754 (-)
G2315 NA non-coding downstream 4946 6763493 ~ 6799910 (-)
G2303 NA non-coding downstream 71309 6731941 ~ 6733547 (-)
G2304 NA non-coding downstream 72279 6732304 ~ 6732577 (-)
G2293 mdh1 non-coding downstream 81979 6695425 ~ 6722877 (-)
G2316 NA non-coding upstream 6348 6813442 ~ 6814405 (-)
G2317 NA non-coding upstream 15010 6822104 ~ 6822463 (-)
G2318 NA non-coding upstream 20049 6827143 ~ 6828105 (-)
G2319 NA non-coding upstream 34280 6841374 ~ 6841602 (-)
G2320 NA non-coding upstream 39427 6846521 ~ 6846749 (-)
spred2a spred2 other downstream 223258 6540642 ~ 6581598 (-)
G2219 NA other downstream 270413 6521506 ~ 6534443 (-)
G2177 NA other downstream 537618 6266606 ~ 6267238 (-)
LOC120563747 LOC104946033 other downstream 597966 6200947 ~ 6206890 (-)
G2146 NA other downstream 693264 6111139 ~ 6111592 (-)
vps54 vps54 other upstream 1658 6808752 ~ 6876237 (-)
LOC120565104 peli1,LOC103372217,LOC100709940,LOC102294912,LOC101486541,LOC108247092,LOC107382286 other upstream 82194 6889288 ~ 6938987 (-)
LOC120571633 otx1,LOC102233826 other upstream 192077 6999171 ~ 7017659 (-)
trnae-uuc NA other upstream 214480 7021574 ~ 7021645 (-)
trnae-uuc_1 NA other upstream 216023 7023117 ~ 7023188 (-)

Expression


Co-expression Network