G2316



Basic Information


Item Value
gene id G2316
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6813442 ~ 6814405 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU3244
atggcgcgatcacttcccgctgcctcaagatagcaacacgcccacaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcgcgcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcacgcccacaatgcacctgaacacacctccctgtaagaccagcacgcccacaatgcacctgaacacacctccctgtaagaccagcacgccc
>TU3245
atggcgcgatcacttcccgctgcctcaagatagcaacacgcccacaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcgcgcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccttgtaagaccagcacgcccagaatgtacctgaacacacctccctgtaagtccagcacgcccagaatgcacctgaacacacc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU3244 True 295 lncRNA 0.52 2 6813442 6814405
TU3245 False 273 lncRNA 0.43 2 6814091 6814405

Neighbor


gene id symbol gene type direction distance location
LOC120569746 NA coding downstream 17834 6795494 ~ 6795608 (-)
LOC120569800 NA coding downstream 18726 6794604 ~ 6794716 (-)
LOC120569742 NA coding downstream 19236 6794092 ~ 6794206 (-)
LOC120569795 NA coding downstream 20123 6793207 ~ 6793319 (-)
LOC120569752 NA coding downstream 20637 6792691 ~ 6792805 (-)
zgc:66455 NA coding upstream 326329 7140734 ~ 7155323 (-)
b3gnt2a NA coding upstream 344465 7158870 ~ 7223862 (-)
LOC120565981 NA coding upstream 427415 7241820 ~ 7246413 (-)
LOC120562943 NA coding upstream 435176 7249581 ~ 7255345 (-)
LOC120565143 NA coding upstream 478142 7292547 ~ 7307876 (-)
G2292 NA non-coding downstream 6348 6804856 ~ 6807094 (-)
G2289 NA non-coding downstream 8688 6803930 ~ 6804754 (-)
G2315 NA non-coding downstream 13532 6763493 ~ 6799910 (-)
G2303 NA non-coding downstream 79895 6731941 ~ 6733547 (-)
G2304 NA non-coding downstream 80865 6732304 ~ 6732577 (-)
G2317 NA non-coding upstream 7699 6822104 ~ 6822463 (-)
G2318 NA non-coding upstream 12738 6827143 ~ 6828105 (-)
G2319 NA non-coding upstream 26969 6841374 ~ 6841602 (-)
G2320 NA non-coding upstream 32116 6846521 ~ 6846749 (-)
G2322 NA non-coding upstream 42729 6857134 ~ 6859716 (-)
spred2a spred2 other downstream 231844 6540642 ~ 6581598 (-)
G2219 NA other downstream 278999 6521506 ~ 6534443 (-)
G2177 NA other downstream 546204 6266606 ~ 6267238 (-)
LOC120563747 LOC104946033 other downstream 606552 6200947 ~ 6206890 (-)
G2146 NA other downstream 701850 6111139 ~ 6111592 (-)
LOC120565104 peli1,LOC103372217,LOC100709940,LOC102294912,LOC101486541,LOC108247092,LOC107382286 other upstream 74883 6889288 ~ 6938987 (-)
LOC120571633 otx1,LOC102233826 other upstream 184766 6999171 ~ 7017659 (-)
trnae-uuc NA other upstream 207169 7021574 ~ 7021645 (-)
trnae-uuc_1 NA other upstream 208712 7023117 ~ 7023188 (-)
commd1 commd1,LOC102781613,LOC103150757 other upstream 410935 7225340 ~ 7240150 (-)

Expression



Co-expression Network