G2342


Basic Information

Item Value
gene id G2342
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6948269 ~ 6977637 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3276
gtgtgtctctgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctctg
>TU3277
gtgtgtctctgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgctgctgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgctgtgtgtctgtgtgtgtgtgtgtgtg
>TU3278
gtgtgtctctgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtctgtgtgtgtgtgtgtgtgtctctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3276 False 287 lncRNA 0.46 2 6948269 6977637
TU3277 True 397 lncRNA 0.45 2 6948406 6977637
TU3278 False 266 lncRNA 0.48 2 6977280 6977637

Neighbor

gene id symbol gene type direction distance location
LOC120569746 NA coding downstream 152661 6795494 ~ 6795608 (-)
LOC120569800 NA coding downstream 153553 6794604 ~ 6794716 (-)
LOC120569742 NA coding downstream 154063 6794092 ~ 6794206 (-)
LOC120569795 NA coding downstream 154950 6793207 ~ 6793319 (-)
LOC120569752 NA coding downstream 155464 6792691 ~ 6792805 (-)
zgc:66455 NA coding upstream 163097 7140734 ~ 7155323 (-)
b3gnt2a NA coding upstream 181233 7158870 ~ 7223862 (-)
LOC120565981 NA coding upstream 264183 7241820 ~ 7246413 (-)
LOC120562943 NA coding upstream 271944 7249581 ~ 7255345 (-)
LOC120565143 NA coding upstream 314910 7292547 ~ 7307876 (-)
G2327 NA non-coding downstream 60870 6886366 ~ 6887399 (-)
G2326 NA non-coding downstream 62432 6885076 ~ 6885837 (-)
G2322 NA non-coding downstream 88553 6857134 ~ 6859716 (-)
G2320 NA non-coding downstream 101520 6846521 ~ 6846749 (-)
G2319 NA non-coding downstream 106667 6841374 ~ 6841602 (-)
trnae-uuc_2 NA non-coding upstream 54457 7032094 ~ 7032165 (-)
trnae-uuc_3 NA non-coding upstream 57532 7035169 ~ 7035240 (-)
trnae-uuc_4 NA non-coding upstream 58242 7035879 ~ 7035950 (-)
trnae-uuc_5 NA non-coding upstream 59248 7036885 ~ 7036956 (-)
trnae-uuc_6 NA non-coding upstream 60875 7038512 ~ 7038583 (-)
LOC120565104 peli1,LOC103372217,LOC100709940,LOC102294912,LOC101486541,LOC108247092,LOC107382286 other downstream 9282 6889288 ~ 6938987 (-)
vps54 vps54 other downstream 72032 6808752 ~ 6876237 (-)
spred2a spred2 other downstream 366671 6540642 ~ 6581598 (-)
G2219 NA other downstream 413826 6521506 ~ 6534443 (-)
G2177 NA other downstream 681031 6266606 ~ 6267238 (-)
LOC120571633 otx1,LOC102233826 other upstream 21534 6999171 ~ 7017659 (-)
trnae-uuc NA other upstream 43937 7021574 ~ 7021645 (-)
trnae-uuc_1 NA other upstream 45480 7023117 ~ 7023188 (-)
commd1 commd1,LOC102781613,LOC103150757 other upstream 247703 7225340 ~ 7240150 (-)
LOC120569296 NA other upstream 354319 7331956 ~ 7372558 (-)

Expression


Co-expression Network