G2557



Basic Information


Item Value
gene id G2557
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7941547 ~ 7948253 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU3574
gtcatttccacgGCAACAGCTCGGttgtaccagtgttgctttaGCCAAGGCTACAACCTACTCAGATGTTCCAAAGTCATTTTATCCTGGAAATCTCACAACTCATTATTCATTTCTTAATACCCGTTTatgaaaggaaaaacaaatgacCCAAAAGATACACTGACCCCACAGGCTCTCACAGATCATTTCCCAATACGCGGAATACATAAAAGTGTTTCCTTACGTCACCAGCCAGCTGATCAAACAGCCTCCTCAGCATTTTCTCCTCTTTTGTCTCATCCTCTGGGGCGGTGGGCATGGGCGGATCTGGCAGGCTTGCGTCAACGTTGCTCCCCAGCTCAAGAGCTGCGGTCTTCCTCTCAGAGTAGATCCGGATGATGAAGTCGGCCTCTTTGTGGGGCTGGAAGATGGTGGGGACCAGCACGTATTTCCCCGAAGGCAGCTCGAAGCGCTCCGTTATCTCCCGCATGTTGATGTAGGTCTTGCTGCGAGCCGCGGACGGGTTGTAGCGGAAGAAGTCTTTCCCCAGGTGGTCCCCGTCTTCTGGGGCctTGTACAATGCGAAGCCGATGGTCTCCAGgtccattccttccttcctcttcctccgtcTGTCTTTCTGCATCAGAGCGATGATCACGCTGCACACGTCGTCGTTGTCATCCTCAGCGTCCTCCAGCTGCATCTGGAACTGTGGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU3574 True 698 TUCP 0.52 4 7941547 7948253

Neighbor


gene id symbol gene type direction distance location
ifngr1 NA coding upstream 28397 7900622 ~ 7913150 (+)
LOC120565283 NA coding upstream 53173 7876002 ~ 7888374 (+)
LOC120562006 NA coding upstream 67947 7866252 ~ 7873600 (+)
LOC120565228 NA coding upstream 108040 7827589 ~ 7833507 (+)
LOC120563316 NA coding upstream 124272 7810774 ~ 7817275 (+)
nup133 nup133 coding downstream 31616 7979869 ~ 8031864 (+)
acta1a actc1a,act2,zgc:86709,LOC105024319,LOC102689871,LOC100534413 coding downstream 90066 8038319 ~ 8049387 (+)
ccsapa NA coding downstream 104270 8052523 ~ 8064500 (+)
LOC120558905 NA coding downstream 161090 8109343 ~ 8115194 (+)
LOC120558930 NA coding downstream 262818 8211071 ~ 8215041 (+)
G2545 ltv1 non-coding upstream 23966 7913752 ~ 7917581 (+)
G2534 NA non-coding upstream 133183 7752713 ~ 7808364 (+)
LOC120563307 NA non-coding upstream 166621 7770713 ~ 7774926 (+)
G2524 NA non-coding upstream 281452 7659400 ~ 7660095 (+)
G2523 NA non-coding upstream 282524 7658404 ~ 7659023 (+)
G2561 NA non-coding downstream 15004 7963257 ~ 7965276 (+)
G2563 NA non-coding downstream 22536 7970789 ~ 7971223 (+)
G2562 taf5l non-coding downstream 26020 7974273 ~ 7975034 (+)
G2564 NA non-coding downstream 27416 7975669 ~ 7975881 (+)
G2565 NA non-coding downstream 27908 7976161 ~ 7976497 (+)
G2530 NA other upstream 242007 7699265 ~ 7699540 (+)
G1973 NA other upstream 1407177 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 1504330 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 1538907 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 2025173 5876547 ~ 5916374 (+)
G2590 NA other downstream 141560 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 453462 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 669130 8617383 ~ 8643702 (+)
abcc10 abcc10,LOC107102248 other downstream 721918 8670171 ~ 8702455 (+)
zbtb45 zbtb45,LOC102796714,LOC102207372,LOC100704009,LOC104952775,LOC103470204,LOC101487628 other downstream 943062 8891315 ~ 8911908 (+)

Expression



Co-expression Network