G2960


Basic Information

Item Value
gene id G2960
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 8799491 ~ 8800133 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4173
caaaggaccctagggtgaattactccgaaccatcactttaatgactTTACATACGTCACCGTGAACAGGTTTCATTGCATCTTCTTTTTACTGAAAATATAGTTCCTTTGAAAACTGATCACAGTGAAGTCTGTTGAAGTCTTGTCGTTGCTGATGTTGAAAATGtgtatatttagtttttaaatgcAGATGGCAGCACATCCAAATACTGTTCACCTCCATTGATTTGGTGTTGCAGCAGAACTTTCAGAGACAGATATGTCAAAATCTGGGCACATAAACCTGAAGTTATCTGCAGGGATAGGTACCATAAAGGGTAAGTCAGAACAATATATATTTTGAAGAGAGTGAAGATTTATCCTTGACTTTGGAAACCAGCAGTTTAGAAAACAATCAAGGTCTATTATAGCTGCTCTGGAGCCTTTGATAAAAAAAGGCAGATAGAGTTTGCCCAGTTTTCATGTAATATGTTAAGATAAAACCTTTTTGGGGACTTTAAGGGCTTCTTGTCCATGTCCTTGAATGTTTGGACATCTGCAAATCCAACAAGTGAGCAAACTTcatctgctgaggaagatcatgatcaaaagctccagaacagcaaCTAATTGGACCTTGAGGTGAGATTGTTCAAAAGTGGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4173 True 643 lncRNA 0.48 1 8799491 8800133

Neighbor

gene id symbol gene type direction distance location
ptp4a1 ptp4a1,LOC107563655,LOC107597142 coding downstream 12825 8776022 ~ 8786666 (-)
si:dkey-23f9.4 NA coding downstream 60203 8732068 ~ 8739288 (-)
gpr179 gpr179,LOC107098834 coding downstream 192718 8575233 ~ 8606773 (-)
npepps npepps,LOC102793525,LOC107098842,LOC108244358 coding downstream 237193 8519935 ~ 8562298 (-)
c1h6orf120 clg6h6orf120,LOC101075423,LOC104933027,LOC103359067,LOC102197258,LOC101473941 coding downstream 282239 8512245 ~ 8517252 (-)
LOC120569430 NA coding upstream 1120 8801253 ~ 8817185 (-)
myom2a myom2,LOC103359051,LOC101482792,LOC102300862 coding upstream 18154 8818287 ~ 8857778 (-)
dla LOC103359048,LOC108245305 coding upstream 112249 8912382 ~ 8919144 (-)
LOC120559379 NA coding upstream 143712 8943845 ~ 8954842 (-)
LOC120565400 NA coding upstream 206806 9006939 ~ 9011578 (-)
G2937 NA non-coding downstream 41391 8756366 ~ 8758100 (-)
G2894 NA non-coding downstream 154300 8644195 ~ 8645191 (-)
G2892 NA non-coding downstream 157009 8641303 ~ 8642482 (-)
G2882 NA non-coding downstream 269729 8528949 ~ 8529762 (-)
G2878 NA non-coding downstream 280894 8505134 ~ 8518597 (-)
G2961 NA non-coding upstream 267 8800400 ~ 8800729 (-)
LOC120558812 NA non-coding upstream 90713 8890846 ~ 8892363 (-)
LOC120559564 NA non-coding upstream 171541 8971674 ~ 8986610 (-)
LOC120559581 NA non-coding upstream 174471 8974604 ~ 8980978 (-)
G3036 NA non-coding upstream 226874 9027007 ~ 9027944 (-)
G2938 LOC107098689,LOC103359055 other downstream 31518 8758649 ~ 8767973 (-)
wipf2a NA other downstream 298329 8435799 ~ 8501162 (-)
G2840 NA other downstream 589956 8207252 ~ 8209535 (-)
capn9 capn9 other downstream 841870 7935940 ~ 7957621 (-)
G2752 NA other downstream 1035543 7739824 ~ 7763948 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other upstream 105539 8905672 ~ 8908086 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other upstream 708471 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other upstream 725128 9525261 ~ 9567845 (-)
G3373 LOC103359075 other upstream 1040457 9840590 ~ 10042004 (-)
LOC120559237 LOC103359075 other upstream 1057947 9858080 ~ 10211304 (-)

Expression


Co-expression Network