G3036


Basic Information

Item Value
gene id G3036
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 9027007 ~ 9027944 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4262
TGAGCCAGCGAAGCCAAAGCAAAGACCACGCTCGCTGTTTAATTTAAGTAATTCACATTAAGGTAGAGCTAAGCAATAGCCCCAAAGTCCAGACAATGTTTAATCAAAACAGAGCACCATGCAATATAATGAGTGTTAATGCTTCTATGTGAATAATTTAGTTTTcgtttttaaaaaacatgatctTTAAGCAAATCATATGCTGACTTATTGCTTAATTTCAAAACTCTTATGTTTGAAAGATCCCAAAATACTATTGAAACCAGACCATTATGTGgtataaaaccaaaaaaaattaacaatggtttaaaagttttttaaaaattGCAGTGCTCAAAGCAACTGCTGCAGATTTTATCCAGCGCCAGAGATTCTCCAATTACGTTCAATCTAAGCTGTGGCTGATCAATGATCCAATGTTTTTATAGAAAGGGTTTTCTTAACGGAATCATGCAAAAAATAGTTTATCTGGATGAATTCTATCATCTGAATGATGACAAATTTGCTTATTTCTggaagtaaaaaacaaacaaacaaaaaaatacatttagcatgCGTTATCAGAACTCGCATATCAAAGTCAGAACGGTTTCGTATGATTTAAAGTTGATTCATTTTATCCACATCATGCAACTTTACATCTAAGAGCAAAGCTAGCAGTGGAGGATTTCATTCAACTGTTGGTACCAGTTTGGAACACTCACTCCCGCCTTGATGAATGTCCAGCGGTAAGTTCCCGgcttttgtttggctgttctgGCCAACGCTTCTGTATGTTagtcacagtaaaaaaaaaaagacgtactacagttaaaaaaacatgataataAACAAAGAGGAATAATAATTAATACTGCCCAAGTCCTGTCCGCGAGGTGTGGGGTTTTACAGTGAGATCTCCTGAGCAGGAGAGAAACAGATCCTGGTCACAGGCGGAG

Function

GO: NA

KEGG:

id description
ko03030 DNA replication
ko03410 Base excision repair
ko03420 Nucleotide excision repair
ko03450 Non-homologous end-joining

RNA

RNA id representative length rna type GC content exon number start site end site
TU4262 True 938 lncRNA 0.36 1 9027007 9027944

Neighbor

gene id symbol gene type direction distance location
LOC120565400 NA coding downstream 15429 9006939 ~ 9011578 (-)
LOC120559379 NA coding downstream 72165 8943845 ~ 8954842 (-)
dla LOC103359048,LOC108245305 coding downstream 107863 8912382 ~ 8919144 (-)
myom2a myom2,LOC103359051,LOC101482792,LOC102300862 coding downstream 169229 8818287 ~ 8857778 (-)
LOC120569430 NA coding downstream 209822 8801253 ~ 8817185 (-)
lcor LOC103370035,LOC102205115,LOC102298371,LOC101480656,LOC102797307,LOC105931196 coding upstream 138044 9165988 ~ 9246905 (-)
hoga1 hoga1,LOC102797601 coding upstream 277003 9304947 ~ 9331554 (-)
LOC120559457 LOC103383201,LOC105931257 coding upstream 368886 9396830 ~ 9412357 (-)
LOC120559444 LOC103373853,LOC100706153,LOC102224648,LOC104962798,LOC108246276 coding upstream 449736 9477680 ~ 9489740 (-)
atpv0e2 LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 coding upstream 550498 9578442 ~ 9587966 (-)
LOC120559564 NA non-coding downstream 40397 8971674 ~ 8986610 (-)
LOC120559581 NA non-coding downstream 46029 8974604 ~ 8980978 (-)
LOC120558812 NA non-coding downstream 134644 8890846 ~ 8892363 (-)
G2961 NA non-coding downstream 226278 8800400 ~ 8800729 (-)
G2960 NA non-coding downstream 226874 8799491 ~ 8800133 (-)
G3052 NA non-coding upstream 93769 9121713 ~ 9124011 (-)
G3053 NA non-coding upstream 98239 9126183 ~ 9126700 (-)
G3048 NA non-coding upstream 125306 9153250 ~ 9153699 (-)
G3049 NA non-coding upstream 127995 9155939 ~ 9160172 (-)
G3309 NA non-coding upstream 379727 9407671 ~ 9496783 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other downstream 118921 8905672 ~ 8908086 (-)
G2938 LOC107098689,LOC103359055 other downstream 259034 8758649 ~ 8767973 (-)
wipf2a NA other downstream 525845 8435799 ~ 8501162 (-)
G2840 NA other downstream 817472 8207252 ~ 8209535 (-)
capn9 capn9 other downstream 1069386 7935940 ~ 7957621 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other upstream 480660 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other upstream 497317 9525261 ~ 9567845 (-)
G3373 LOC103359075 other upstream 812646 9840590 ~ 10042004 (-)
LOC120559237 LOC103359075 other upstream 830136 9858080 ~ 10211304 (-)
G3586 LOC104950333 other upstream 1871614 10899558 ~ 10905235 (-)

Expression


Co-expression Network