G321 (LOC106675347,LOC106676307,LOC106676577,LOC107663003,LOC107395936,LOC107379945)


Basic Information

Item Value
gene id G321
gene name LOC106675347,LOC106676307,LOC106676577,LOC107663003,LOC107395936,LOC107379945
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 1383130 ~ 1383452 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU430
GGGCTCATGGATCCCGCCGTCTGTTGGGGTCTGGCCACAGGACCTCATCGACATTGCAAGCAATGTCTTCTCCTGCTAGGCACCGGGGAAAATATCCCCTTGCATGTCGAAACCATCCATGGATTGCTGTCACCTGAATGTCGCTGCAGGCCTGTTCCATTGCCTGCAGAAGAGGCATGCGGGCATGTGGTTGGCGGTCATATACACGCCATCTCCAAGCCGAAAAGAATTCCTCTATAGGGTTTAAAAATGGTGAGTAAGGGGGCAAGTATACCACTTCAAATTGATTGTGGTTGGTGAACCAGGCCTGGACCAGAGCAGCC

Function

NR:

description
uncharacterized protein LOC106675347

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU430 True 323 lncRNA 0.61 1 1383130 1383452

Neighbor

gene id symbol gene type direction distance location
LOC120566750 NA coding upstream 14078 1363957 ~ 1369052 (+)
LOC120566495 NA coding upstream 35936 1341624 ~ 1347194 (+)
LOC120566489 NA coding upstream 115865 1260019 ~ 1267265 (+)
LOC120566570 NA coding upstream 125026 1252768 ~ 1258104 (+)
LOC120566607 NA coding upstream 147157 1227358 ~ 1235973 (+)
LOC120566759 NA coding downstream 6317 1389769 ~ 1399264 (+)
LOC120566800 NA coding downstream 56388 1439840 ~ 1446325 (+)
LOC120566732 NA coding downstream 196862 1580314 ~ 1581696 (+)
polr3f polr3f,LOC102798306 coding downstream 594868 1978320 ~ 1986023 (+)
LOC120561186 sptbn1,LOC100697102 coding downstream 612284 1995736 ~ 2061046 (+)
G310 NA non-coding upstream 28752 1354136 ~ 1354378 (+)
G309 NA non-coding upstream 31080 1351520 ~ 1352050 (+)
LOC120566887 NA non-coding upstream 79595 1302713 ~ 1303535 (+)
G195 NA non-coding upstream 187880 885107 ~ 1195250 (+)
G322 NA non-coding downstream 1005 1384457 ~ 1384658 (+)
G317 NA non-coding downstream 17427 1400879 ~ 1403020 (+)
G325 NA non-coding downstream 27841 1411293 ~ 1411514 (+)
G329 NA non-coding downstream 58100 1441552 ~ 1579015 (+)
LOC120566892 NA non-coding downstream 76416 1459868 ~ 1461132 (+)
G149 LOC104959125,LOC105030654 other upstream 70699 1311867 ~ 1312431 (+)
G151 NA other upstream 164045 1193661 ~ 1219085 (+)
G165 NA other upstream 224571 1144654 ~ 1158559 (+)
G292 NA other upstream 238717 1116624 ~ 1144413 (+)
G199 NA other upstream 364092 1016907 ~ 1019038 (+)
G355 NA other downstream 152763 1536215 ~ 1536697 (+)
G369 NA other downstream 198586 1582038 ~ 1919824 (+)
G363 LOC104946033,LOC104961227 other downstream 210370 1593822 ~ 1879546 (+)
LOC120566853 snrpb2,LOC102212107,LOC102301910,LOC101474810 other downstream 363119 1746571 ~ 1836460 (+)
LOC120566000 NA other downstream 562693 1946145 ~ 1967255 (+)

Expression


Co-expression Network