G3315


Basic Information

Item Value
gene id G3315
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 9518305 ~ 9605820 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4644
AAATGTTAAAGCTAAAGTTACGCCCCTGGTCTAATCCTAATCTACCGACACACATATTCCAGTGTTGATTTGGCGGTCTGTTGTACATGAACAGTGGCTGCTAGGAGCTTTACACAGCTGTTTGCTGGTTTTGGAACGTCAGCCAGAGAGATTTTTGAGAAACACAGGTGCTCGGCTCTGGATCTCAAATGGAACGACGACACGTGCGAGGCAGCTGAGACGCACCTCGCGGCTTTAACCAAAACCAAGTCAGTCGTTTCTGTCGGGATCAGAGGCCGGCTGCGGATGCGaggacattaaaaaaaaacgccGGCGTCTCGTTAGAAATGAAATGCTATACCTTCTCGGTATCAAGCGGAGGCTTCCCCGCGGGGAGAATAAAGACGGAGTAGTCCCATCCCCGCTGGGCCTTTAATCCGTCGGAAAACACGTCGGATGACGGCAGGAAAGGAAAACCGAGAGACTAGCAAACATTCCACAATAATAACCATGTCATATAATGTACAGCAACCTTTActtttctcttcttcctttttctgTCCGTCTTTTTCCGTAACCACAATACTACAGTAATACTTCGGACCTGTTAACACATTAACACATCTTTATGTACAATTCCTTCGTCAGTATGTAACCTttaagaaaatagaaaaaaagaaaaaaaaaaaaatacaagaagtGCCGTACAAATAGAAGcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4644 True 698 lncRNA 0.49 2 9518305 9605820

Neighbor

gene id symbol gene type direction distance location
LOC120559444 LOC103373853,LOC100706153,LOC102224648,LOC104962798,LOC108246276 coding downstream 28565 9477680 ~ 9489740 (-)
LOC120559457 LOC103383201,LOC105931257 coding downstream 105948 9396830 ~ 9412357 (-)
hoga1 hoga1,LOC102797601 coding downstream 186751 9304947 ~ 9331554 (-)
lcor LOC103370035,LOC102205115,LOC102298371,LOC101480656,LOC102797307,LOC105931196 coding downstream 271400 9165988 ~ 9246905 (-)
LOC120565400 NA coding downstream 506727 9006939 ~ 9011578 (-)
LOC120565745 NA coding upstream 566265 10172085 ~ 10181987 (-)
LOC120567750 LOC103370659 coding upstream 891503 10497323 ~ 10571770 (-)
LOC120567745 LOC101486982,LOC102213734 coding upstream 973465 10579285 ~ 10624015 (-)
ccdc130 ccdc130 coding upstream 1019504 10625324 ~ 10631727 (-)
wdr83 wdr83,LOC102798015 coding upstream 1041257 10647077 ~ 10655066 (-)
G3309 NA non-coding downstream 21522 9407671 ~ 9496783 (-)
G3331 NA non-coding downstream 23819 9493794 ~ 9494486 (-)
LOC120559537 NA non-coding downstream 42290 9474686 ~ 9476015 (-)
G3049 NA non-coding downstream 358133 9155939 ~ 9160172 (-)
G3048 NA non-coding downstream 364606 9153250 ~ 9153699 (-)
G3346 NA non-coding upstream 33221 9639041 ~ 9652295 (-)
G3352 NA non-coding upstream 41785 9647605 ~ 9683644 (-)
G3348 NA non-coding upstream 47963 9653783 ~ 9696009 (-)
G3360 NA non-coding upstream 87504 9693324 ~ 9824263 (-)
G3361 NA non-coding upstream 95251 9701071 ~ 9765048 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other downstream 610219 8905672 ~ 8908086 (-)
G2938 LOC107098689,LOC103359055 other downstream 750332 8758649 ~ 8767973 (-)
wipf2a NA other downstream 1017143 8435799 ~ 8501162 (-)
G2840 NA other downstream 1308770 8207252 ~ 8209535 (-)
capn9 capn9 other downstream 1560684 7935940 ~ 7957621 (-)
G3373 LOC103359075 other upstream 234770 9840590 ~ 10042004 (-)
LOC120559237 LOC103359075 other upstream 252260 9858080 ~ 10211304 (-)
G3586 LOC104950333 other upstream 1293738 10899558 ~ 10905235 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other upstream 1360542 10966362 ~ 10993201 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 3036193 12642013 ~ 12659983 (-)

Expression


Co-expression Network