G27


Basic Information

Item Value
gene id G27
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 184232 ~ 185239 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47
cactcacacacacatcaacacacagagagagacacacacacacacatcaacacatcattttctgtgtgtctgtccatcAATCATCTCTCAGGTTTAAATGAATGATGTCATACATGTGTTTGATTCCTCTGTCCGTCTCTGTGGAGCAGTGCATTATGGGAAGGCACAGCGTGACGGCAGCAGGTAACGATGGACCCAGCGTGTCGTAGACAGTAGTGACGGTGACACCAGCAGGAAACATCAAAGTAGCGGCAAAAAATCCtgacaaaatgtccaaaaatagTCCggcaaaaactgtgaaaaaacctgacaaaatgtcaaataaaatggcaaaaatagTCCGGcaaaaactgtgaaataatCTGACTAAATGTCCAAAAAATTGGCAAAAATAGCCTGgcaaaaactgtcaaaaaacctgacaaaatgtcaaataaaatggcaaaaatagTCCGgcaaaaactgtcaaaaaacctgacaaaatgtcaaaataaaatggcaaaaatagTCCGGcaaaaactgtgaaataatctgacaaaatgtcaaaaaaaatggcaaaaatagCCCGGcaaaaactgtgaaataatctgacaAAATGTCCAAAAAATTGGCAAAAATAGCCCGGcaaaaactgtgaaataatCTGACAAAATGTCCCAAGAATTGGCAAAAATAGCCCAGcaaaaactgtgaaataatCTGACAAAATGTCCCAAAATTGGCAAAAATAACCCGGCAAAACTGTGAAATAATCTGACAAAATGTCCAAAGAATTGGCAAAAATAACCTGGcaaaaactgtgaaataatCTGACAAAATGTCCTAAAAATTGGCAAAAATTACCCGCAAAACTGTGAAATAATCTGACAAAATGTCCAAAGAATTGGCAAAATAACCTGGCAAAACTGTGAAATAATCTGACAAAATGTCCAAAGAATTGGCAAAAATAGCCTGGC
>TU48
cactcacacacacatcaacacacagagagagacacacacacacacatcaacacatcattttctgtgtgtctgtccatcAATCATCTCTCAGGTTTAAATGAATGATGTCATACATGTGTTTGATTCCTCTGTCCGTCTCTGTGGAGCAGTGCATTATGGGAAGGCACAGCGTGACGGCAGCAGGTAACGATGGACCCAGCGTGTCGTAGACAGTAGTGACGGTGACACCAGCAGGAAACATCAAAGTAGCGGCAAAAAATCCtgacaaaatgtccaaaaatagTCCGGcaaaaactgtgaaataatctgacaaaatgtcaaaaaaaatggcaaaaatagCCCGGcaaaaactgtgaaataatctgacaAAATGTCCAAAAAATTGGCAAAAATAGCCCGGcaaaaactgtgaaataatCTGACAAAATGTCCCAAGAATTGGCAAAAATAGCCCAGcaaaaactgtgaaataatCTGACAAAATGTCCCAAAATTGGCAAAAATAACCCGGCAAAACTGTGAAATAATCTGACAAAATGTCCAAAGAATTGGCAAAAATAACCTGGcaAAAACTGTGAAATAATCTGACAAAATGTCCAAAGAATTGGCAAAAATAGCCTGGC
>TU49
cactcacacacacatcaacacacagagagagacacacacacacacatcaacacatcattttctgtgtgtctgtccatcAATCATCTCTCAGGTTTAAATGAATGATGTCATACATGTGTTTGATTCCTCTGTCCGTCTCTGTGGAGCAGTGCATTATGGGAAGGCACAGCGTGACGGCAGCAGGTAACGATGGACCCAGCGTGTCGTAGACAGTAGTGACGGTGACACCAGCAGGAAACATCAAAGTAGCGGCAAAAAATCCtgacaaaatgtccaaaaatagTCCggcaaaaactgtgaaaaaacctgacaaaatgtcaaataaaatggcaaaaatagTCCGgcaaaaactgtcaaaaaacctgacaaaatgtcaaaataaaatggcaaaaatagTCCGGcaaaaactgtgaaataatctgacaaaatgtcaaaaaaaatggcaaaaatagCCCGGcaaaaactgtgaaataatctgacaaaatgtccaaaaaattgGCAAAAATAGTCCGGcaaaaactgtgaaataatCTGACAAAATGTCCCAAAATTGGCAAAAATAACCCGGCAAAACTGTGAAATAATCTGACAAAATGTCCAAAGAATTGGCAAAAATAACCTGGcaaaaactgtgaaataatCTGACAAAATGTCCTAAAAATTGGCAAAAATTACCCGCAAAACTGTGAAATAATCTGACAAAATGTCCAAAGAATTGGCAAAATAACCTGGCAAAACTGTGAAATAATCTGACAAAATGTCCAAAGAATTGGCAAAAATAGCCTGGC
>TU50
cactcacacacacatcaacacacagagagagacacacacacacacatcaacacatcattttctgtgtgtctgtccatcAATCATCTCTCAGGTTTAAATGAATGATGTCATACATGTGTTTGATTCCTCTGTCCGTCTCTGTGGAGCAGTGCATTATGGGAAGGCACAGCGTGACGGCAGCAGGTAACGATGGACCCAGCGTGTCGTAGACAGTAGTGACGGTGACACCAGCAGGAAACATCAAAGTAGCGGCAAAAAATCCtgacaaaatgtccaaaaatagTCCggcaaaaactgtgaaaaaacctgacaaaatgtcaaataaaatggcaaaaatagTCCGgcaaaaactgtcaaaaaacctgacaaaatgtcaaaataaaatggcaaaaatagTCCGGcaaaaactgtgaaataatctgacaaaatgtcaaaaaaaatggcaaaaatagCCCGGcaaaaactgtgaaataatctgacaaaatgtccaaaaaattgGCAAAAATAGCCTGGcaaaaactgtgaaataatCTGACAAAATGTCCTAAAAATTGGCAAAAATTACCCGCAAAACTGTGAAATAATCTGACAAAATGTCCAAAGAATTGGCAAAATAACCTGGCAAAACTGTGAAATAATCTGACAAAATGTCCAAAGAATTGGCAAAAATAGCCTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47 True 956 lncRNA 0.57 2 184232 185239
TU48 False 623 lncRNA 0.34 4 184232 185239
TU49 False 788 lncRNA 0.39 3 184232 185239
TU50 False 678 lncRNA 0.46 3 184232 185239

Neighbor

gene id symbol gene type direction distance location
rbm34 LOC103399136,LOC103383372 coding downstream 244953 430192 ~ 439191 (+)
LOC120560448 NA coding downstream 266737 451976 ~ 453564 (+)
LOC120566701 NA coding downstream 273139 458378 ~ 462863 (+)
LOC120566520 NA coding downstream 285506 470745 ~ 473664 (+)
LOC120566531 NA coding downstream 301373 486612 ~ 494282 (+)
G4 NA non-coding upstream 114928 68208 ~ 69304 (+)
G6 NA non-coding downstream 20612 205851 ~ 214248 (+)
G30 NA non-coding downstream 30222 215461 ~ 279466 (+)
G31 NA non-coding downstream 30756 215995 ~ 216362 (+)
G2 NA non-coding downstream 44125 229364 ~ 309093 (+)
G8 NA non-coding downstream 80915 266154 ~ 277468 (+)
LOC120560058 NA other upstream 1929 158391 ~ 182303 (+)
G11 NA other upstream 110563 23490 ~ 73669 (+)
LOC120559874 LOC103372511,LOC100698978,LOC102208596,LOC101483657 other upstream 117732 854 ~ 66500 (+)
LOC120560073 LOC103372506,LOC102203670,LOC101482513,LOC102296948 other downstream 15174 200413 ~ 224596 (+)
rrp36 rrp36 other downstream 105994 291233 ~ 320779 (+)
G184 NA other downstream 292732 477971 ~ 481890 (+)
G176 LOC104946033 other downstream 398151 583390 ~ 598207 (+)
LOC120566394 NA other downstream 522914 708153 ~ 753762 (+)

Expression


Co-expression Network