G3360


Basic Information

Item Value
gene id G3360
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 9693324 ~ 9824263 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4703
CCGGTATATCTTCCACCTTCTTGGTTTGTTGTGAACCTGAACTTGTACACagctgagtctctctctctcaggtctgaGATTCTCAGAGTGCAGTCCTTGTCATTAGAACTGTACTGCACACGACCTGAATATTCTGAGTCTGTTGTCAGATCTACAGGTTGATAATTCATTTTAGTAAACCATAATGTTCTCTCAACTCTAGTAACACTGCTTTTCCACCAGGATGGGTATGTGTAGCTGCAGTGTATTTCCACTGTTGATCCTTTAACAGCACAGATCGGAGTAGAGGTGTAAGTCACTCCCCAGCCATCCTGACTCTGTATCACTGTAACACAGAGAACATCAGGA

Function

GO: NA

KEGG:

id description
ko04145 Phagosome
ko04670 Leukocyte transendothelial migration
ko04380 Osteoclast differentiation
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
TU4703 True 348 lncRNA 0.44 2 9693324 9824263

Neighbor

gene id symbol gene type direction distance location
atpv0e2 LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 coding downstream 105358 9578442 ~ 9587966 (-)
LOC120559444 LOC103373853,LOC100706153,LOC102224648,LOC104962798,LOC108246276 coding downstream 203584 9477680 ~ 9489740 (-)
LOC120559457 LOC103383201,LOC105931257 coding downstream 280967 9396830 ~ 9412357 (-)
hoga1 hoga1,LOC102797601 coding downstream 361770 9304947 ~ 9331554 (-)
lcor LOC103370035,LOC102205115,LOC102298371,LOC101480656,LOC102797307,LOC105931196 coding downstream 446419 9165988 ~ 9246905 (-)
LOC120565745 NA coding upstream 347822 10172085 ~ 10181987 (-)
LOC120567750 LOC103370659 coding upstream 673060 10497323 ~ 10571770 (-)
LOC120567745 LOC101486982,LOC102213734 coding upstream 755022 10579285 ~ 10624015 (-)
ccdc130 ccdc130 coding upstream 801061 10625324 ~ 10631727 (-)
wdr83 wdr83,LOC102798015 coding upstream 822814 10647077 ~ 10655066 (-)
G3352 NA non-coding downstream 9680 9647605 ~ 9683644 (-)
G3346 NA non-coding downstream 41029 9639041 ~ 9652295 (-)
G3315 NA non-coding downstream 87504 9518305 ~ 9605820 (-)
G3309 NA non-coding downstream 196541 9407671 ~ 9496783 (-)
G3376 NA non-coding upstream 39819 9864082 ~ 9864948 (-)
G3386 NA non-coding upstream 45437 9869700 ~ 9870087 (-)
G3387 NA non-coding upstream 48314 9872577 ~ 9875813 (-)
LOC120559540 NA non-coding upstream 74633 9898896 ~ 9902061 (-)
G3396 NA non-coding upstream 97057 9921320 ~ 9980998 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other downstream 52810 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other downstream 125479 9525261 ~ 9567845 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other downstream 785238 8905672 ~ 8908086 (-)
G2938 LOC107098689,LOC103359055 other downstream 925351 8758649 ~ 8767973 (-)
wipf2a NA other downstream 1192162 8435799 ~ 8501162 (-)
G3373 LOC103359075 other upstream 16327 9840590 ~ 10042004 (-)
LOC120559237 LOC103359075 other upstream 33817 9858080 ~ 10211304 (-)
G3586 LOC104950333 other upstream 1075295 10899558 ~ 10905235 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other upstream 1142099 10966362 ~ 10993201 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 2817750 12642013 ~ 12659983 (-)

Expression


Co-expression Network