G3367


Basic Information

Item Value
gene id G3367
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 9771572 ~ 9772935 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4711
TAACAaggtacatacacatataattgggaagaaaatacagcatgacatgaggagagacgaggagaaaaaggcaactcccagactatgccccTGAATAGGggtacagtgtgggaacaggaaaaaaacacctcagcacatataacacaacataacaatataacatgacaCGCAGTGGGGGTGGGATGATGGGTGCATCGGGATGGGGGTCATGGAGTAGAGGTAGTCCAGGACAGGCAAACagacatctggtcctgcagccaaacaaaggcgCTGGCCCCAGACCTGCCCGCCTGACTGGGGGAAGAAGCGGTGAAGGCGCTGGATAGGGGGCTGGGGTGTGGTTGcaaatctgtatgtatgtcaaagtttgtgtatgtgtaggccTGATTAGTCAAGCTACGTCTGGCCCCCGTAATCTGGTTTACTCAGTCCGCACGATTGTCATTGCGATACACagccggttgccatggagtcagccCTGAAACAGGACCCAGTACGAGTCAACAATCAACAGGTGTCTGTGGGAGTCGGGTGGGGAAAATGAAGAGTGTGCCTCGCTGTAGTGCTCCAGGGGGAGTGAGTATTCAACACCGGCCTTGGCCAAGGCCAGCGCTGGTTCAGGAGCCGAAAAGATaaggttggaatttgttttgtcttggggTTGAGGAACCGGCAGTTAGTCACTCCCGACTTCTCTGAAATGTCCCCTCTGGTCTCCGTAACGATCAAATTTCCTTGCCAAAACCGTGAGTTTCCCCAagatgttgtccagcttgtCCAGAGCTGACTGTCTCTCCAAGATGGTATCCAATTTTGGGCCCATGATAATCACAGTATCCAATTTGTGGCTCATGGAGTTCAGAGTCACAATTTGAGTTCCgacagctctgcccacagcttcAACCATGACGGGCAGCCTGGTAATTTACTCTGTTCCCGTCTTCACTTTAATTTCTCGATAAACCAGGGCAAtgcctgagccaatcagcaaaagacCTGTTATCATGGTTCCGAATAGGTAGATATCTTCAATGTCCTCCACGGAAAGAACCGCCAGACACACGACCCGCCACCTCTCCCACGCGTCCATCGTGTAGCCGGCTGCGAACGTCccggcagggcagtcaggtTCCCCCGAACCCGAGCTTCTCGTCGAGAATATGGTGTCAATTGCGCCGAGAGACCAGTTAATCAAATCCATAATTCGTAGTTTAGgagcagtgcagagagagagactctaaaAGTACAAGAAACAGCAGACAGCACGAGACAAGATAGCAAGCAGGGTAGGCCTGggggg

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU4711 True 1300 lncRNA 0.45 2 9771572 9772935

Neighbor

gene id symbol gene type direction distance location
atpv0e2 LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 coding downstream 183606 9578442 ~ 9587966 (-)
LOC120559444 LOC103373853,LOC100706153,LOC102224648,LOC104962798,LOC108246276 coding downstream 281832 9477680 ~ 9489740 (-)
LOC120559457 LOC103383201,LOC105931257 coding downstream 359215 9396830 ~ 9412357 (-)
hoga1 hoga1,LOC102797601 coding downstream 440018 9304947 ~ 9331554 (-)
lcor LOC103370035,LOC102205115,LOC102298371,LOC101480656,LOC102797307,LOC105931196 coding downstream 524667 9165988 ~ 9246905 (-)
LOC120565745 NA coding upstream 399150 10172085 ~ 10181987 (-)
LOC120567750 LOC103370659 coding upstream 724388 10497323 ~ 10571770 (-)
LOC120567745 LOC101486982,LOC102213734 coding upstream 806350 10579285 ~ 10624015 (-)
ccdc130 ccdc130 coding upstream 852389 10625324 ~ 10631727 (-)
wdr83 wdr83,LOC102798015 coding upstream 874142 10647077 ~ 10655066 (-)
G3361 NA non-coding downstream 6524 9701071 ~ 9765048 (-)
G3368 NA non-coding downstream 16544 9751329 ~ 9755028 (-)
G3348 NA non-coding downstream 75563 9653783 ~ 9696009 (-)
G3352 NA non-coding downstream 87928 9647605 ~ 9683644 (-)
G3346 NA non-coding downstream 119277 9639041 ~ 9652295 (-)
LOC120559598 NA non-coding upstream 20297 9793232 ~ 9795990 (-)
G3376 NA non-coding upstream 91147 9864082 ~ 9864948 (-)
G3386 NA non-coding upstream 96765 9869700 ~ 9870087 (-)
G3387 NA non-coding upstream 99642 9872577 ~ 9875813 (-)
LOC120559540 NA non-coding upstream 125961 9898896 ~ 9902061 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other downstream 131058 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other downstream 203727 9525261 ~ 9567845 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other downstream 863486 8905672 ~ 8908086 (-)
G2938 LOC107098689,LOC103359055 other downstream 1003599 8758649 ~ 8767973 (-)
wipf2a NA other downstream 1270410 8435799 ~ 8501162 (-)
G3373 LOC103359075 other upstream 67655 9840590 ~ 10042004 (-)
LOC120559237 LOC103359075 other upstream 85145 9858080 ~ 10211304 (-)
G3586 LOC104950333 other upstream 1126623 10899558 ~ 10905235 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other upstream 1193427 10966362 ~ 10993201 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 2869078 12642013 ~ 12659983 (-)

Expression


Co-expression Network