G3493


Basic Information

Item Value
gene id G3493
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 10624780 ~ 10625062 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4872
GGATATGCTCCAGTGTGCTAACTCACCCAAGTATGAAGCAAAATCTGACAGTTTTAAGAAAAGTTTTAATCAGTTTTTCCACATTGTATGAGTAGACAGCTAAATGTGTAGTGATTGTACCAAAAAAGGAACCCAGGACTTTTTGTACAGTGCAGttgatattgtattgttctTTTCAgtgttcagaaaatgtcactgcATGTTACAGACAGgttctttctttgtctgttgCTGAGGGTTTTACAGTATGTAACTGTTGAAATGACCTGCAATGCACTGTGgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4872 True 283 lncRNA 0.31 1 10624780 10625062

Neighbor

gene id symbol gene type direction distance location
LOC120567745 LOC101486982,LOC102213734 coding downstream 765 10579285 ~ 10624015 (-)
LOC120567750 LOC103370659 coding downstream 53010 10497323 ~ 10571770 (-)
LOC120565745 NA coding downstream 442793 10172085 ~ 10181987 (-)
atpv0e2 LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 coding downstream 1036814 9578442 ~ 9587966 (-)
LOC120559444 LOC103373853,LOC100706153,LOC102224648,LOC104962798,LOC108246276 coding downstream 1135040 9477680 ~ 9489740 (-)
ccdc130 ccdc130 coding upstream 262 10625324 ~ 10631727 (-)
wdr83 wdr83,LOC102798015 coding upstream 22015 10647077 ~ 10655066 (-)
ier2b NA coding upstream 299609 10924671 ~ 10926308 (-)
man2b1 man2b1 coding upstream 397532 11022594 ~ 11047950 (-)
LOC120555815 LOC103383434 coding upstream 428925 11053987 ~ 11076146 (-)
LOC120559609 NA non-coding downstream 411905 10211424 ~ 10212875 (-)
G3439 NA non-coding downstream 463971 10159224 ~ 10160809 (-)
G3424 NA non-coding downstream 524382 10099057 ~ 10100398 (-)
G3421 NA non-coding downstream 525518 10088618 ~ 10099262 (-)
LOC120559577 NA non-coding downstream 550952 10073101 ~ 10073828 (-)
G3498 NA non-coding upstream 32274 10657336 ~ 10662561 (-)
G3557 LOC103372545 non-coding upstream 208508 10833570 ~ 10833876 (-)
G3566 NA non-coding upstream 253629 10878691 ~ 10878890 (-)
G3580 NA non-coding upstream 258085 10883147 ~ 10883412 (-)
G3581 NA non-coding upstream 260768 10885830 ~ 10886075 (-)
LOC120559237 LOC103359075 other downstream 413476 9858080 ~ 10211304 (-)
G3373 LOC103359075 other downstream 582776 9840590 ~ 10042004 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other downstream 984266 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other downstream 1056935 9525261 ~ 9567845 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other downstream 1716694 8905672 ~ 8908086 (-)
G3586 LOC104950333 other upstream 274496 10899558 ~ 10905235 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other upstream 341300 10966362 ~ 10993201 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 2016951 12642013 ~ 12659983 (-)
LOC120561813 NA other upstream 2179440 12804502 ~ 12832356 (-)
trnac-gca NA other upstream 2235222 12860284 ~ 12860355 (-)

Expression


Co-expression Network