G363 (LOC104946033,LOC104961227)


Basic Information

Item Value
gene id G363
gene name LOC104946033,LOC104961227
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 1593822 ~ 1879546 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU495
agctgttctgtaagaccgacctgacatgtgtctgcatgctctgcACTGTTTTAGACCACAAGATGCATGATGTTGTTCCTCTGAAAGAAGAATATGAAGGAAAGAAGGCAGAGCTGGGGAAGACAGAGGCTGAAATTCagcagatgatccagaagagacgactgaagattcaggagatcaaacactcagtcgacctcagtgaggaagatgcagacagagagatagcagaaggtgttcaggtcttcacttctctgaaggagtctgttgagagaggcctgaatgagctcatcaacacgatcaaagagaagcggaaaacaacagaaaaacaggccgaagctttcatcaaagagctg
>TU497
ctccacctcagtgcttctcttcatcagctcagagatttcctgttccaactctttgatgaaagcttcggcctgtttttctgttgttttctgcttctctttgatcgtgttgatgagatttcctgttccagctctttgatgaaagcttcggcctgtttttctgttgttttctgcttctctttgatcgtgttgatgagctcattcaggcctctctcaacagactccttcagagaagtgaagacctgaacaccttctgctatctctctgtctgcatcttcctcactgaggtcgactgagtgtttgatctcctgaatcttcagtcgtctcttctggatcatctgctGAATTTCAGCCTCTGTCTTCCCCAGCTCTGCCTTCTTTCCTTCATATTCTTCTTTCAGAGGAACAACATCATGCATCTTGTGGTCTGAA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM39-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU495 False 353 TUCP 0.34 2 1593822 1879546
TU497 True 429 lncRNA 0.48 2 1850929 1865160

Neighbor

gene id symbol gene type direction distance location
LOC120566732 NA coding upstream 12126 1580314 ~ 1581696 (+)
LOC120566800 NA coding upstream 147497 1439840 ~ 1446325 (+)
LOC120566759 NA coding upstream 194558 1389769 ~ 1399264 (+)
LOC120566750 NA coding upstream 224770 1363957 ~ 1369052 (+)
LOC120566495 NA coding upstream 246628 1341624 ~ 1347194 (+)
polr3f polr3f,LOC102798306 coding downstream 98774 1978320 ~ 1986023 (+)
LOC120561186 sptbn1,LOC100697102 coding downstream 116190 1995736 ~ 2061046 (+)
LOC120566013 NA coding downstream 190599 2070145 ~ 2074287 (+)
LOC120561285 NA coding downstream 257531 2137077 ~ 2185576 (+)
LOC120561330 NA coding downstream 318428 2197974 ~ 2201400 (+)
G329 NA non-coding upstream 14807 1441552 ~ 1579015 (+)
G350 NA non-coding upstream 58236 1521194 ~ 1535586 (+)
G331 NA non-coding upstream 83314 1472927 ~ 1510508 (+)
LOC120566892 NA non-coding upstream 132690 1459868 ~ 1461132 (+)
G325 NA non-coding upstream 182308 1411293 ~ 1411514 (+)
G621 NA non-coding downstream 59228 1938774 ~ 1939052 (+)
G675 NA non-coding downstream 188286 2067832 ~ 2106737 (+)
G676 NA non-coding downstream 203282 2082828 ~ 2129416 (+)
G684 NA non-coding downstream 250710 2130256 ~ 2130784 (+)
G690 NA non-coding downstream 291402 2170948 ~ 2172470 (+)
G355 NA other upstream 57125 1536215 ~ 1536697 (+)
G149 LOC104959125,LOC105030654 other upstream 281391 1311867 ~ 1312431 (+)
G151 NA other upstream 374737 1193661 ~ 1219085 (+)
G165 NA other upstream 435263 1144654 ~ 1158559 (+)
G292 NA other upstream 449409 1116624 ~ 1144413 (+)
LOC120566000 NA other downstream 66599 1946145 ~ 1967255 (+)
G714 LOC103375176,LOC105920176,LOC100706186,LOC101468385 other downstream 427739 2307285 ~ 2346048 (+)
LOC120566146 LOC107082675,LOC108251143,LOC103383281 other downstream 679330 2558876 ~ 2570454 (+)
G879 NA other downstream 746697 2626243 ~ 2700975 (+)
LOC120567073 sos1 other downstream 1115483 2995029 ~ 3080190 (+)

Expression


Co-expression Network