LOC120560073 (LOC103372506,LOC102203670,LOC101482513,LOC102296948)


Basic Information

Item Value
gene id LOC120560073
gene name LOC103372506,LOC102203670,LOC101482513,LOC102296948
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 200413 ~ 224596 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU56
ccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaagcacacacacacacacacataacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacaccacacacacacacataacacacacacacacacacacacacacacacacacacacacacacacacacaccagcagctACACATCCTCTCGCCACACACTTAGTTCAGTTataaacataatatataaatacagctTCCCCTCAGTCCATTAtggttagggctgggtaccgaaactGTGCCAacagggaaccggtgccgacctaaacggtagtaacgagaccgaataagaacgaaagtttcggtgcctcatttcggcgcttgactttacactacacctgacagcacgtaacgttagcctacctttagctagcagctggattaaacagcggtcaaatgctgacagctaacgttaaacagtgtaaagtgtgactgtgtttcactgtggaggactttgtcactacccaaagtgagtagagtgcagctttgagtaGCGCATGCGGCACTCGCGTGCTGGTGCGCACCAAAAAGGGGACCAAACGAGCGTACCGAGACCTGGTCTTGGTACGCTTTCAGTCCAGCTCTCAGTCTGAGCtggtgtctcctgtagtcaggtgtgttcagcaagAAAAATGCACTactccagaacacaggacctgcttcctgtatttactttcttgctcccgcccccccagacacatccgaccaataagaggagttcaattcccactgcgatacatcaaccaatgtgtccctgagcaaggcacttaacccctagttgtagcaatttgtaCGGTAAACCGGTCCTCCCAGCCTGCGGGGGGGGGCAGTCCGCCTCCTCCGACGTCCCCACCTCCGGCTCTGCGTCCGACGCCACCGAGGCCGACGGCAGTTTCCCGGCCAACGGCGAGACGGCCGAGCGCTCCACGCCGCGGCCGCTCAGCCCCACCAAGCtcctccccttcctgtccaacCCTCACCGTTGCCCCGGCGACGCCGACGCCGGGGGCGACCTGGAGGCCCTGCGGCGCCGGCTGCAGCACGCGCCGCGGCCGCTGAAGAAGCGCGGCTCCATCACGGAGCCCGAGGGCCCCACGATGGAGCTCAACATCCAGAAACTGCTCTACCAGAGGACCACGCTGGCCGCCATGGAGACCATCCCCATGGAGACGACGCTGGGCCCTTCtgaagaaggagaaccaggacatGAGAACGCTACCGAGCCACCGCCGAGAGCCGAGACCCCCGAGGCCCCGCCCCCTCTGCCGCCGCGCTCGCCGCTGTCTAACCCCGCCTCCTGTCGCTACGGCGACGAGacggcggaggaggaggaggagggggaggaggaggggggggctcACCGGGACTTCCCCC
>XM_039802184.1
ATGTCTAGGCATGTTGTCAAGGCGTCTACTGTGATGTCCTCACATGCTGCATCCATTGCAGCCAGCAGGGTCATCTACGACGTGGACGACCCCAGCACGCCCAACGACGAGGGCATCACGGCGCTGCACAACGCCGTCTGCGCCGGCCACACGGAGATCGTCAAGTTCCTGGTGCAGTTCGGGGTCAACGCCAACGCCGCCGACAGCGACGGATGgaccCCTCTCCACTGCGCCGCCTCCTGTAACAACGTCCAGGTGTGTAAGTTCCTGGTGGAGTCGGGCGCGGCCGTCTTCGCCACCACGCACAGCGACATGCAGACGGCAGCCGACAAATGTGAGGAGATGGAGGACGGCTACGCCCAGTGCTCCCAGTTCCTCTACGGCGTCCAGGAGAAGATGGGCGTGATGAACCGCGGCGTGGTCTACGCCCTGTGGGACTACGAGCCGCAGAGCGAGGACGAGCTGGGCTTCAGGGAGGGCGACTGCATGACGGTGCTGAGACGGGAGGACGCCGCCGAGACCGAGTGGTGGTGGGCCCGATGCGGGGACCACGAGGGCTACATCCCCCGAAACCTGCTGGGGCTGTATCTGAGGATCAGGCCGCGGCAGAGGAGCCTGGCTTAGCCCGCAAATCCTTCAAAAGAAGACCAAAAACCTCGTGAGGGAAGGACTGCAATCATCCGGACGCAGGATGTCAGAGATGTTTTCCCCAAACTGCCGTTGgacctttattttgttttgtttttttggttgtttcAATCTCAGCACAAAGAATGTCCCAATGAACAGGAGTTAATCTGCATTCTGTGGTCAAATAAAAAGAATCAGTTTATTCAAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56 True 1470 TUCP 0.47 3 211235 214550
XM_039802184.1 False 840 mRNA 0.58 7 200413 224596

Neighbor

gene id symbol gene type direction distance location
rbm34 LOC103399136,LOC103383372 coding downstream 205596 430192 ~ 439191 (+)
LOC120560448 NA coding downstream 227380 451976 ~ 453564 (+)
LOC120566701 NA coding downstream 233782 458378 ~ 462863 (+)
LOC120566520 NA coding downstream 246149 470745 ~ 473664 (+)
LOC120566531 NA coding downstream 262016 486612 ~ 494282 (+)
G25 NA non-coding upstream 1165 167803 ~ 199248 (+)
G27 NA non-coding upstream 15174 184232 ~ 185239 (+)
G4 NA non-coding upstream 131109 68208 ~ 69304 (+)
G2 NA non-coding downstream 4768 229364 ~ 309093 (+)
G8 NA non-coding downstream 41558 266154 ~ 277468 (+)
G40 NA non-coding downstream 49019 273615 ~ 275129 (+)
G36 NA non-coding downstream 88534 313130 ~ 314029 (+)
G48 NA non-coding downstream 121032 345628 ~ 345907 (+)
LOC120560058 NA other upstream 18110 158391 ~ 182303 (+)
G11 NA other upstream 126744 23490 ~ 73669 (+)
LOC120559874 LOC103372511,LOC100698978,LOC102208596,LOC101483657 other upstream 133913 854 ~ 66500 (+)
rrp36 rrp36 other downstream 66637 291233 ~ 320779 (+)
G184 NA other downstream 253375 477971 ~ 481890 (+)
G176 LOC104946033 other downstream 358794 583390 ~ 598207 (+)
LOC120566394 NA other downstream 483557 708153 ~ 753762 (+)
LOC120566368 NA other downstream 683244 907840 ~ 1012869 (+)

Expression


Co-expression Network