G4115 (LOC101079010,LOC105939483,LOC106946826,LOC103153258,LOC106910155)


Basic Information

Item Value
gene id G4115
gene name LOC101079010,LOC105939483,LOC106946826,LOC103153258,LOC106910155
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 13487920 ~ 13491997 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU5634
ttttattttattttttttaaacaaagtagTCAGTAGTAGAAAGATACTTTTAGTTTTCTATAGAGTAATGATCAATTTGGGGGCGATCAGCCATACCTTCCGGTTGTAGTTATGGTCAGGTGACTTGATGTGTTTCTGTATCAGGTGTGGCTGCATTGGAATGAAAAGGTCACATGCTGCGCAGTGAGCCGCTTCCACCTTCCTCATGAAGTGCTCCATACCGAGATCTACACAGACGTGAGAAATATATACAATGAGCAATCACTTAAATTCTCCTGCTTaccacacaaacacgcacgagTTACTTACCCCTGGTGAGGTCCTGCTCTTTGTACACCTGGCAGATGGCAGCACTGTGGTTTTCCAACTGGCCAACCCTCTGATCTGTCTTCTGAAACTTATTCTGCAAATACtcCTGTAGGAACTCTGTAGTGGGCTTGGACAGTTGGCTGGAAAGGAACTTAAAGTGGTCCTTGTGAAAGCGGCTGTCAAGATGAGTTTCCATTTCCTCCTTGTAGAATGAACGGAACTTGCACACAGAGCAGGCAAACATCACCCTTCCAGGAagcccctcctcttcctcattttTGGGTGCTTGTCCTGACTTTGGGTCGGAGTCTGTTTGCCCTGTGGACTTTTCTTGTCCTCCTGTTTGGGTGAAGCTTTATCTCCATCTGCAGTTGGGTTGGTCTCCGGATCTGCTGTTTTTGGTTCGCTGTCGTCcccatttttttctgcttgcTCTTGGGTAACTTCTGACCCAGAACTCTCAGTCTTGTTCATCTTCGACTCTGGCTCATCGGCTGCAGTAAGAGTCTGCTTTCTCTTCTTCTGGACATCACGCTGTGGCTTCACCTGTTTGTTGAGGGGTCTCTTGCGGCCTCGCTGCCGGCCAGCCCGTGGGCCCCCTCCAAAATGCCTCCCAGGAAAGTCGTGAGGCCCTTGAGTGGAACCCTGATGGAAGCCCCCACTCTCAGGGTACATGCGGTTGGACAGGAGGGATGGGAGCTTGCCTCTACCACCTCCTGGAGAGTGGCCGCGGTGGGCCTGGCCACCACTGCCACTGCCCCGCCCACCTCCTCCTAATGGAGTGGGGTCAGACCTGCGGCTTCCAAaccctcctccagctcctcgaCCCCCGGCACTTCCACCCCTTCTGGGGGAACGTCGGCCTGCTCCAGGCCATCCTGCACCTCCAGAGCCTCCTCCATGGCCACTGTTGAAGGACTCCCTCATATTCTGTCGCATTTTAGCGACTCCATAGGAAGAGGAGGGGCTGTCAaagcctcctcctccccctagCCCAATTCCCCCTCCGAAGCCCGAGCCTCCTCGCTGACTCAACAGCATGTTGTCCTCACGGCCATCGCCATAACCATAGCTCCCGCCGCCAGATCTGTAGAGATCTCGGGAGGAGGTGAGAGCGGAGGCGCGCGAGTCGAATGACTCGTAGTGGTCATACCtgcgggagggagggagagggttgATAGAGAAGAGCAGAGAGCAAGGGAGGCAGGTAGGGCAGCCAGGTTCGGATTTCTCCACCTGCTATTCCTTCTCCTCCATGGTCTCGCTTTCTCCATTTGTGTTCTTGTCACTCCCAGCTTTATTTCAGAAACCACATTAGATCAGAAATTGATGATCCAAAACAAATTAACCCTCTGCTTGTGGTCTTTAATAACAAAGTAATGATTTTTCTCGTCATTAGGTTTACAGAAACTCATCCAACCACCTTCTCTGGTGGAGGTTAAACAGTATTCTGCAGATTAGGGGAAAAGCAGTTTCTTAGGCTGTAAAACCTTAAGCAGACATGACCATGGTCTATCAGAACCAGCGATGTCTTAAGATGGGTGCAAGAGGTGAAATATCCTGGGAAGTGACTTGATTATGGTAAATACTCAAGAAAGGGGATAAAACAAActggggctttttttttctcagtgggCAAGAGTTTTGAAGATACAGCAGGCAGCTTTCAATTAACAACTGAGCTTgacaaaataatacataaagCTAACACCTGTAAACTCATCTCTCTTGCGTAACCTAAAGCCAGAACACAGAGTTAGGTCACATGGAGGATGAGAGAAACA

Function

NR:

description
PREDICTED: A-kinase anchor protein 8-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5634 True 2093 lncRNA 0.50 7 13487920 13491997

Neighbor

gene id symbol gene type direction distance location
LOC120558389 LOC104933357,LOC103367030,LOC103383226,LOC100692841 coding downstream 13361 13428440 ~ 13474559 (-)
LOC120568624 LOC107104464 coding downstream 72247 13408733 ~ 13415673 (-)
LOC120564537 NA coding downstream 83775 13393147 ~ 13404145 (-)
LOC120564530 NA coding downstream 95885 13384811 ~ 13392035 (-)
LOC120567325 LOC104941710 coding downstream 130218 13322665 ~ 13357702 (-)
soul5l LOC104926857,LOC103375185,LOC100694454 coding upstream 106733 13598730 ~ 13607821 (-)
LOC120558365 gpr108,LOC107090075 coding upstream 118302 13610299 ~ 13623167 (-)
LOC120558503 NA coding upstream 138597 13630594 ~ 13632316 (-)
LOC120558275 NA coding upstream 158753 13650750 ~ 13658617 (-)
micall2b LOC103369616,LOC102192527,LOC102076226 coding upstream 295212 13787209 ~ 13805843 (-)
G4066 NA non-coding downstream 215746 13195046 ~ 13272174 (-)
G4032 NA non-coding downstream 330703 13089192 ~ 13157217 (-)
LOC120567935 NA non-coding downstream 335074 13151720 ~ 13152846 (-)
LOC120567932 NA non-coding downstream 336297 13138058 ~ 13151623 (-)
G3995 NA non-coding downstream 422859 13058846 ~ 13065061 (-)
LOC120558524 NA non-coding upstream 28004 13520001 ~ 13536248 (-)
LOC120558530 NA non-coding upstream 273196 13765193 ~ 13767856 (-)
G4354 NA non-coding upstream 553363 14045360 ~ 14045719 (-)
G4359 NA non-coding upstream 563446 14055443 ~ 14056457 (-)
LOC120558581 NA non-coding upstream 575851 14067848 ~ 14071547 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 447640 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 459527 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 621881 12865968 ~ 12866039 (-)
trnac-gca_2 NA other downstream 625319 12862530 ~ 12862601 (-)
trnac-gca_1 NA other downstream 626155 12861694 ~ 12861765 (-)
G4168 NA other upstream 39756 13531753 ~ 13567266 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other upstream 526905 14018902 ~ 14042510 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 1220147 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 1409149 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 1934547 15426544 ~ 15685639 (-)

Expression


Co-expression Network