G4443


Basic Information

Item Value
gene id G4443
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14297089 ~ 14297452 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU6056
TTCTTTGGGCAAATGATAATATCCAGTAAAGCGAAGAAAAAAAGTGAGGGTTAAATCCAGGCAGAAAAAggtgaagataaaaaaaagaatcaatcaTAGCAACTCCAGGGATCAGCACTCTGCCTGGCAGCACATGGTTGCCCAAGCAGGAAATCCAGCTGGTTCTGCATACAAACAGGCACTCACATTCTtccaaatgtagcctactttttcTTAGTCATACTTAGGTGCTGtttctctgcttttctttcAGAGCAAAGAAAACGGTTTCAGAGACTTGATTTTAATTTATCTCCTTTTTTAAGccattttctcctctctcctgtctgttCTCCTCCATTCCGGTTTGTTTGGTGTGTTTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6056 True 364 lncRNA 0.40 1 14297089 14297452

Neighbor

gene id symbol gene type direction distance location
parn parn,LOC103366231,LOC102788671 coding downstream 44242 14242155 ~ 14252847 (-)
eri2 eri2,LOC106594655 coding downstream 67184 14225177 ~ 14229905 (-)
thumpd1 thumpd1,LOC102789252 coding downstream 72690 14221724 ~ 14224399 (-)
LOC120557653 LOC103366227,LOC103383461 coding downstream 93835 14181150 ~ 14203254 (-)
LOC120567413 LOC104965219 coding downstream 118043 14150329 ~ 14179046 (-)
mad1l1 mad1l1 coding upstream 144927 14442379 ~ 14515836 (-)
LOC120567649 LOC103373062,LOC102206023,LOC101469992,LOC102313636,LOC102077197,LOC102776633 coding upstream 260443 14557895 ~ 14590616 (-)
LOC120567658 LOC103373371,LOC101468855,LOC102204912,LOC104921159,LOC102786911 coding upstream 318737 14616189 ~ 14645852 (-)
iqce NA coding upstream 349567 14647019 ~ 14664075 (-)
palb2 NA coding upstream 401230 14698682 ~ 14710968 (-)
LOC120558606 NA non-coding downstream 188396 14105951 ~ 14108693 (-)
LOC120558586 NA non-coding downstream 218090 14078317 ~ 14078999 (-)
LOC120558581 NA non-coding downstream 225542 14067848 ~ 14071547 (-)
G4359 NA non-coding downstream 240632 14055443 ~ 14056457 (-)
G4354 NA non-coding downstream 251370 14045360 ~ 14045719 (-)
G4450 NA non-coding upstream 142004 14439456 ~ 14439663 (-)
G4566 NA non-coding upstream 553509 14850961 ~ 14852833 (-)
G4658 NA non-coding upstream 672029 14969481 ~ 14970706 (-)
G4659 actbb,LOC102799139,LOC103383494,LOC102218394,LOC101168921,LOC108244554,LOC106519625 non-coding upstream 673928 14971380 ~ 14973191 (-)
G4663 NA non-coding upstream 701689 14999141 ~ 14999689 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 254579 14018902 ~ 14042510 (-)
G4168 NA other downstream 729823 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 1256809 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 1268696 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 1431050 12865968 ~ 12866039 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 414692 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 603694 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 1129092 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 2048266 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 3114601 17412053 ~ 17421098 (-)

Expression


Co-expression Network