G435


Basic Information

Item Value
gene id G435
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 1689521 ~ 1696030 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU606
GATGGAAAAAACACAGCGGTGAAAATTTTGATAGAGCAGACACCTTGTCTTGCTgcagtggccaatcatgtaacagagaTCAGAGTTGTCAGagtgttttgaggcggtgtgagagtcccgtacaggaaacaggaaacatcactgcctctatctctgccacgAGAACGTtttaaaactccaaacacaGGCTCTATCAGCCCGGGAGTTtggggaacagctgactgtttcctcaGTCCCTCCATCAGTCCCGCTGAATGTTTCCTGtaacaacaaagcactcgctATATCTCactcatctcttttctttctctctttctccgggaaataaagctgccttcaagttcAGTCAGAAATGTGGAGATCTATAGACCATCTGACAGATAACAGTaagtgtgaaatataaagtgtacttgtgctacattgagAAGTCACAAAAACAGGCTGTTTCAGTGACACTCCCACCGCTGCACAACTCTGCC

Function

GO:

id name namespace
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU606 True 479 lncRNA 0.43 2 1689521 1696030

Neighbor

gene id symbol gene type direction distance location
LOC120560873 LOC104946033 coding downstream 60362 1625530 ~ 1629159 (-)
tomm20b tomm20,LOC103375291,LOC103383373,LOC100703030,LOC108247505 coding downstream 230654 1451999 ~ 1458867 (-)
LOC120566769 NA coding downstream 1111529 572764 ~ 577992 (-)
tbce NA coding downstream 1259537 404857 ~ 429984 (-)
LOC120560351 NA coding downstream 1359488 319682 ~ 330033 (-)
LOC120566021 NA coding upstream 401339 2097369 ~ 2106501 (-)
LOC120566031 NA coding upstream 432543 2128573 ~ 2135521 (-)
sde2 NA coding upstream 556022 2252052 ~ 2266353 (-)
LOC120566094 LOC103375177,LOC102205209,LOC101467885,LOC100705917 coding upstream 575430 2271460 ~ 2302586 (-)
LOC120566106 LOC105920176,LOC103375176,LOC108251144 coding upstream 607534 2303564 ~ 2345270 (-)
G457 NA non-coding downstream 83 1615890 ~ 1689438 (-)
LOC120566920 NA non-coding downstream 13540 1609532 ~ 1675981 (-)
G459 NA non-coding downstream 64384 1616694 ~ 1625137 (-)
G593 NA non-coding downstream 90413 1581983 ~ 1599108 (-)
G583 NA non-coding downstream 113745 1548032 ~ 1575776 (-)
G466 NA non-coding upstream 73146 1769176 ~ 1792739 (-)
G441 NA non-coding upstream 81413 1777443 ~ 1789759 (-)
G608 NA non-coding upstream 89760 1785790 ~ 1803387 (-)
G438 NA non-coding upstream 113137 1809167 ~ 1849971 (-)
G609 NA non-coding upstream 127928 1823958 ~ 1836576 (-)
stab2 NA other downstream 113026 1470417 ~ 1576495 (-)
G565 LOC105912973,LOC105893694,LOC105900140,LOC105893089 other downstream 329048 1359664 ~ 1360473 (-)
G519 NA other downstream 714694 966236 ~ 974827 (-)
G516 myhz1.2,LOC106938366,LOC104959125 other downstream 803178 885349 ~ 886343 (-)
G413 NA other downstream 1250073 438657 ~ 439448 (-)
LOC120566421 NA other upstream 37516 1733546 ~ 1749692 (-)
G670 LOC103370005,LOC106529077 other upstream 353039 2049069 ~ 2050384 (-)
G974 NA other upstream 1162466 2858496 ~ 2859302 (-)
G1003 tmem178a other upstream 1267710 2963740 ~ 2964320 (-)
G1008 tmem178a,LOC102307988 other upstream 1279208 2975238 ~ 2978115 (-)

Expression


Co-expression Network