ubl5 (ubl5)


Basic Information

Item Value
gene id ubl5
gene name ubl5
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14901146 ~ 14904229 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU6236
AGCACACAAACTGAATCAGCTTTACGGTAAACAGGACGGAGAGCGGTCCAGAAAATATCGTTGAAGCATCGAAGTGGGAATATTTGTTATACTGCTGTGAATTTCCAGGAACTGAAGATGATCGAGGTGGTTTGCAACGATCGCCTGGGCAAGAAAGTCCGCGTCAAGTGCAACTCTGAGGACACCATTGGTGATCTAAAGAAGCTCATTGCTGCCCAGACAGGAACCCGATTTGACAAGATTGTGCTTAAGAAATGGTATACCATATTCAAGGACCACGTGTCTCTCGGTGACTATGAAATCCATGATGGGATGAACCTGGAGCTGTACTACCAGTAGACCACAGGAGGACCACCACTTGATTGCACACAGATGACCCTTTTacttagacagacagacagacagacagacagacagacagacagacagaatctGTTGCAGGAAACCACCATGATCAGACAACCCAACTGATGGAGAGATGGCGCAGTATCTACAAAGCAGAAAACTCATACATGACATTGATCTCCGTTTTAGCTTATGATTTTTGCCCTTCAAATTGTGTGAAAGACATGTTGTTTTAacgtttttgttttgatattttggAATTAAAGCAGATATTTACCTACTT
>XM_039804816.1
ATTTGATTGGTTGAGAAGCTAGCACACAAACTGAATCAGCTTTACGGTAAACAGGACGGAGAGCGGTCCAGAAAATATCGTTGAAGCATCGAAGTGGGAATATTTGTTATACTGCTGTGAATTTCCAGGAACTGAAGATGATCGAGGTGGTTTGCAACGATCGCCTGGGCAAGAAAGTCCGCGTCAAGTGCAACTCTGAGGACACCATTGGTGATCTAAAGAAGCTCATTGCTGCCCAGACAGGAACCCGATTTGACAAGATTGTGCTTAAGAAATGGTATACCATATTCAAGGACCACGTGTCTCTCGGTGACTATGAAATCCATGATGGGATGAACCTGGAGCTGTACTACCAGTAGACCACAGGAGGACCACCACTTGATTGCACACAGATGACCCTTTTacttagacagacagacagacagacagacagacagacagacagacagaatctGTTGCAGGAAACCACCATGATCAGACAACCCAACTGATGGAGAGATGGCGCAGTATCTACAAAGCAGAAAACTCATACATGACATTGATCTCCGTTTTAGCTTATGATTTTTGCCCTTCAAATTGTGTGAAAGACATGTTGTTTTAacgtttttgttttgatattttggAATTAAAGCAGATATTTACCTACTTGCAA

Function

symbol description
ubl5 Predicted to enable protein tag. Involved in positive regulation of protein targeting to mitochondrion. Located in cytoplasm.

NR:

description
ubiquitin-like protein 5 isoform X1

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K13113 UBL5, HUB1; ubiquitin-like protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
TU6236 False 628 TUCP 0.47 5 14901150 14904209
XM_039804816.1 True 652 mRNA 0.43 5 14901146 14904229

Neighbor

gene id symbol gene type direction distance location
sh2d3a sh2d3a,LOC104966618 coding downstream 24964 14856366 ~ 14876182 (-)
LOC120562191 NA coding downstream 76250 14811342 ~ 14824896 (-)
LOC120567499 NA coding downstream 93830 14805750 ~ 14807316 (-)
palb2 NA coding downstream 190178 14698682 ~ 14710968 (-)
iqce NA coding downstream 237071 14647019 ~ 14664075 (-)
smcr8b NA coding upstream 136618 15040847 ~ 15052712 (-)
mief2 mief2,LOC102193621,LOC100697825 coding upstream 150222 15054451 ~ 15063940 (-)
alkbh5 alkbh5 coding upstream 161419 15065648 ~ 15070738 (-)
myo15ab myo15a,LOC102296698,LOC101486664 coding upstream 168553 15072782 ~ 15131877 (-)
zgc:77849 LOC104921184,LOC104966096,LOC102796782,LOC100695168,LOC101467750,LOC103369343 coding upstream 389642 15293871 ~ 15298838 (-)
G4566 NA non-coding downstream 48313 14850961 ~ 14852833 (-)
G4450 NA non-coding downstream 461483 14439456 ~ 14439663 (-)
G4443 NA non-coding downstream 603694 14297089 ~ 14297452 (-)
LOC120558606 NA non-coding downstream 792453 14105951 ~ 14108693 (-)
LOC120558586 NA non-coding downstream 822147 14078317 ~ 14078999 (-)
G4658 NA non-coding upstream 65252 14969481 ~ 14970706 (-)
G4659 actbb,LOC102799139,LOC103383494,LOC102218394,LOC101168921,LOC108244554,LOC106519625 non-coding upstream 67151 14971380 ~ 14973191 (-)
G4663 NA non-coding upstream 94912 14999141 ~ 14999689 (-)
G4670 NA non-coding upstream 108696 15012925 ~ 15013189 (-)
G4669 NA non-coding upstream 124257 15028486 ~ 15029138 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 182044 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 858636 14018902 ~ 14042510 (-)
G4168 NA other downstream 1333880 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 1860866 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 1872753 12990564 ~ 13028393 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 522315 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 1441489 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 2507824 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 2806410 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 2913278 17817507 ~ 17835761 (-)

Expression


Co-expression Network