G4713


Basic Information

Item Value
gene id G4713
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 15199745 ~ 15263432 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU6397
TTTACTTATTTACAGATTGTACAGAGGTACTGAGTGACAAGGTAGTATTTACAACACAACTAGTAGCTTAGAAACCCCTGAACTTATACACAAGTGAGATACACGGCAGGGAGACCCGGAGGACTACACACCAACGCACTCCTTTCACccagtactgtatataatatgtgGACACCTGGACCAAACTTCCACATGTTCCTCGACGGTGGCTGGCGTTGTGCAGGAGCCAGCTGGGCGCCATATTGGTGACATCGCAGGCCGAGAGTCGGGAGTGTTTAAGCATCTGGGGCTCCAGTCAGATATGGTGCACAAACCAGGGTGGAGGGGAACGTTGGTACATGTAGCCTCAGTTGGTCAACTCAGGGACAACTCTGGCGTTGCAGCAAAATAGGTACCACCGAAAACACAAGCACGtcatgcaatttaaaaaaaatcaaacaaaaggtTGGTGTAAAAATCTGTGTGATGGTGGATGTACAAAACTCATTCTACATGCTCTCTTAACCACAACAGCACAGAcgcaacatgtgtgtgtgtgtgtttgcgtgtgtgtgcgaaactgtatttgtgttgtatgaGTAAGAGCCGGGTCAAATGTTATGTGTGGGACGAAGGGAAGAGAGTACAGaaaagtatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6397 True 733 lncRNA 0.43 2 15199745 15263432

Neighbor

gene id symbol gene type direction distance location
myo15ab myo15a,LOC102296698,LOC101486664 coding downstream 67868 15072782 ~ 15131877 (-)
alkbh5 alkbh5 coding downstream 129007 15065648 ~ 15070738 (-)
mief2 mief2,LOC102193621,LOC100697825 coding downstream 135805 15054451 ~ 15063940 (-)
smcr8b NA coding downstream 147033 15040847 ~ 15052712 (-)
sh2d3a sh2d3a,LOC104966618 coding downstream 323563 14856366 ~ 14876182 (-)
zgc:77849 LOC104921184,LOC104966096,LOC102796782,LOC100695168,LOC101467750,LOC103369343 coding upstream 30439 15293871 ~ 15298838 (-)
LOC120561684 NA coding upstream 47266 15310698 ~ 15311959 (-)
LOC120557175 NA coding upstream 49000 15312432 ~ 15313905 (-)
foxk1 foxk1 coding upstream 113768 15377200 ~ 15393673 (-)
LOC120564677 LOC104962345,LOC107388844,LOC108244157 coding upstream 132403 15395835 ~ 15401445 (-)
G4710 NA non-coding downstream 45599 15153544 ~ 15154146 (-)
G4668 NA non-coding downstream 145678 15053466 ~ 15054067 (-)
G4669 NA non-coding downstream 170607 15028486 ~ 15029138 (-)
G4670 NA non-coding downstream 186556 15012925 ~ 15013189 (-)
G4663 NA non-coding downstream 200056 14999141 ~ 14999689 (-)
G4722 arpc1a,LOC102781765 non-coding upstream 14826 15278258 ~ 15321383 (-)
G4729 arpc1b,LOC100695691,LOC102293678,LOC101469153 non-coding upstream 64756 15328188 ~ 15329291 (-)
G4797 NA non-coding upstream 467223 15730655 ~ 15730956 (-)
G4798 NA non-coding upstream 471923 15735355 ~ 15735682 (-)
G4799 NA non-coding upstream 472357 15735789 ~ 15736178 (-)
ubl5 ubl5 other downstream 295516 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 480643 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 1157235 14018902 ~ 14042510 (-)
G4168 NA other downstream 1632479 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 2159465 13037270 ~ 13040280 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 163112 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 1082286 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 2148621 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 2447207 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 2554075 17817507 ~ 17835761 (-)

Expression


Co-expression Network