G497


Basic Information

Item Value
gene id G497
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 761235 ~ 762243 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU668
gaaaagggcaacagaaacgtgacagagacagaatacaaggccaaggcgaccagggacaggaggagGTGCAGGGCTCAGACAGTGAAAGGGAAAGCAGAGTGCCTGGGCCATCACCAACCATCTCCAGTCAAGCTGGTCCACACGGTATGGAAATTGTTGATGCATAGTATACTAAGTTagatatgaataagaacaacaaatgacaaagcttaaatatgaataattagggaaagttgtcagtgtgaaagtTTGATGAGATgggagtttttatattttgtgtagaatgtattttagatctattgctcagattaaatataaaaaataaaaaaaatatataaataaaacaaaaaataaacaaatgaacctaaaaatactctcccaggctaaagtgttagtgtgtgttaacccagtctgatggttagaactaatcaatgacagttcctaatcttgtacaaatgctgcctgcaacagtttgcttcccctctcacacatctgcctcTCATCACCTGGGTCTTAACTTAATTCCTGtcctgtgataatgccccttacttctatcatacttctatatctcctattaagtgagatcacattgtatggtcacttattcctaatatgaactgtttcaaatgaaaccccaaatgcaggacactgattgcatgagatgaagTTTGTCTGGATGAGtgtgtaaatggcagcctgggcccttttgtagtgtgtataTACTATTTCTCATTACACTGTGATaactgattaaattcagtaaatatacgtctgacatatgttgccacccctcaaaaattcctgcccccctctTGCCATCCcagaaatatttttctagatccgcccctg

Function

GO:

id name namespace
GO:0005507 copper ion binding molecular_function

KEGG:

id description
ko04141 Protein processing in endoplasmic reticulum
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU668 True 849 lncRNA 0.41 2 761235 762243

Neighbor

gene id symbol gene type direction distance location
LOC120566769 NA coding downstream 183243 572764 ~ 577992 (-)
tbce NA coding downstream 331251 404857 ~ 429984 (-)
LOC120560351 NA coding downstream 431202 319682 ~ 330033 (-)
LOC120560232 LOC103372506 coding downstream 454605 277480 ~ 306630 (-)
LOC120560139 gtdc1 coding downstream 490697 254800 ~ 270538 (-)
tomm20b tomm20,LOC103375291,LOC103383373,LOC100703030,LOC108247505 coding upstream 689756 1451999 ~ 1458867 (-)
LOC120560873 LOC104946033 coding upstream 863287 1625530 ~ 1629159 (-)
LOC120566021 NA coding upstream 1335126 2097369 ~ 2106501 (-)
LOC120566031 NA coding upstream 1366330 2128573 ~ 2135521 (-)
sde2 NA coding upstream 1489809 2252052 ~ 2266353 (-)
G491 NA non-coding downstream 39441 632055 ~ 721794 (-)
G420 NA non-coding downstream 177897 486618 ~ 583338 (-)
G483 NA non-coding downstream 206135 554710 ~ 555100 (-)
G473 NA non-coding downstream 238233 522610 ~ 523002 (-)
LOC120566883 NA non-coding downstream 243193 515579 ~ 518042 (-)
LOC120566899 NA non-coding upstream 124644 886887 ~ 887829 (-)
G517 NA non-coding upstream 127485 889728 ~ 1307445 (-)
G518 NA non-coding upstream 133428 895671 ~ 896115 (-)
LOC120566903 NA non-coding upstream 161447 923690 ~ 1044413 (-)
G521 NA non-coding upstream 205079 967322 ~ 968520 (-)
G413 NA other downstream 321787 438657 ~ 439448 (-)
LOC120574930 LOC103372508,LOC108249786,LOC103470876,LOC102234899 other downstream 514262 233044 ~ 246973 (-)
G65 NA other downstream 529302 227526 ~ 231933 (-)
LOC120567035 NA other downstream 603997 154328 ~ 157238 (-)
G63 NA other downstream 607009 151749 ~ 154226 (-)
G516 myhz1.2,LOC106938366,LOC104959125 other upstream 123106 885349 ~ 886343 (-)
G519 NA other upstream 203993 966236 ~ 974827 (-)
G565 LOC105912973,LOC105893694,LOC105900140,LOC105893089 other upstream 597421 1359664 ~ 1360473 (-)
stab2 NA other upstream 708174 1470417 ~ 1576495 (-)
LOC120566421 NA other upstream 971303 1733546 ~ 1749692 (-)

Expression


Co-expression Network