G5125 (LOC103362543,LOC101066958,LOC101475774,LOC104921624,LOC102209940,LOC103384338)


Basic Information

Item Value
gene id G5125
gene name LOC103362543,LOC101066958,LOC101475774,LOC104921624,LOC102209940,LOC103384338
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 16649045 ~ 16651526 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU6910
GCTGATTTTGGGAACTGGCCTGGACTCTTCactTTTGGTGTAGGATGACACCTTGCTCCCTCTGTCTGGCTCCCTCTCTTTCTTACCATCTTttggACTGCTCCCATTGGTCACATTCTTGCTGTAGTATTTCTTCTTCTCATATTTATCCCTGATGAAGAATTCCACAGCTTGGTCTGTTTGAGGTCTTCTGAAGCCTTCTGGAAGGTTGGCCTCATAAAGCCGCCTGGCATTGGTGTTACCCATATCCTGTATACTCTGGATTTGTTCTGAGGTCCATTGGTCCAGGTTGACTGATTTGACCCTGGATATGTGTACTCCAAGGTTCCTGTGGATGCCAGCACACCGGATGCAGATAAATACTCCCAGATTCCAGGATGCCCATCTTGGAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6910 True 392 lncRNA 0.44 5 16649045 16651526

Neighbor

gene id symbol gene type direction distance location
slc2a15b LOC104962528,LOC103362553,LOC104921621,LOC100709092,LOC103384337 coding downstream 53396 16577214 ~ 16595649 (-)
fgf8b LOC101474337,LOC104946029,LOC102786057 coding downstream 94825 16550243 ~ 16554220 (-)
poll poll,LOC102785494 coding downstream 103767 16537655 ~ 16545278 (-)
wbp1lb wbp1l coding downstream 111529 16516500 ~ 16537516 (-)
as3mt as3mt coding downstream 132645 16508901 ~ 16516400 (-)
krt94 LOC104921625,LOC107090776,LOC103384339 coding upstream 12313 16663839 ~ 16667306 (-)
LOC120561619 LOC104921626 coding upstream 40161 16691687 ~ 16695377 (-)
LOC120561596 LOC103384341,LOC104922281 coding upstream 51436 16702962 ~ 16705385 (-)
LOC120569500 NA coding upstream 59238 16710764 ~ 16717109 (-)
hap1 LOC100707478,LOC101477593,LOC102309093,LOC102207703 coding upstream 74474 16726000 ~ 16751403 (-)
G5079 mettl26 non-coding downstream 296577 16350067 ~ 16352468 (-)
G5081 NA non-coding downstream 299062 16348266 ~ 16349983 (-)
G5069 NA non-coding downstream 323199 16325521 ~ 16325846 (-)
G5068 NA non-coding downstream 323722 16325015 ~ 16325323 (-)
LOC120558721 NA non-coding downstream 333158 16311929 ~ 16315887 (-)
G5140 LOC103362533 non-coding upstream 110842 16762368 ~ 16843003 (-)
LOC120568012 NA non-coding upstream 265548 16917074 ~ 16920726 (-)
G5202 NA non-coding upstream 316383 16967909 ~ 16972243 (-)
G5242 NA non-coding upstream 400102 17051628 ~ 17051857 (-)
G5261 NA non-coding upstream 408635 17060161 ~ 17060543 (-)
LOC120558720 NA other downstream 301123 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 963406 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 1744816 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 1929943 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 2606535 14018902 ~ 14042510 (-)
LOC120569099 NA other upstream 760527 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 1059113 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 1165981 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 1184378 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 1228342 17879868 ~ 17881759 (-)

Expression


Co-expression Network