G517


Basic Information

Item Value
gene id G517
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 889728 ~ 1307445 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU702
TTATTCAAATTAAGAACAATTATATATAATCACCAAATTATTACCTTTTCAATGAGCTCAATGCAGGCAGCCAAGTCCATGCCAAAGTCAATGAACTCCCAGATAATACCCTCCTTCTTGTACTCCTCTTGCTCCAGGACAAACATGGTGTGGTTGAAAAACTGTTGCAGTTTCTCATTGGTGAAGTTGATGCACAGCTGTTCCAAGGTGTTGAACTGTGAGGGGACAATTAACCAGTATAATCTCTCGCAGGGCAATATGAAAagtattcatatatatatatatatatatatgaattgtTGGAAATGAAGCTTACATCAAAGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU702 True 326 lncRNA 0.44 2 889728 1307445

Neighbor

gene id symbol gene type direction distance location
LOC120566769 NA coding downstream 311736 572764 ~ 577992 (-)
tbce NA coding downstream 459744 404857 ~ 429984 (-)
LOC120560351 NA coding downstream 559695 319682 ~ 330033 (-)
LOC120560232 LOC103372506 coding downstream 583098 277480 ~ 306630 (-)
LOC120560139 gtdc1 coding downstream 619190 254800 ~ 270538 (-)
tomm20b tomm20,LOC103375291,LOC103383373,LOC100703030,LOC108247505 coding upstream 144554 1451999 ~ 1458867 (-)
LOC120560873 LOC104946033 coding upstream 318085 1625530 ~ 1629159 (-)
LOC120566021 NA coding upstream 789924 2097369 ~ 2106501 (-)
LOC120566031 NA coding upstream 821128 2128573 ~ 2135521 (-)
sde2 NA coding upstream 944607 2252052 ~ 2266353 (-)
LOC120566899 NA non-coding downstream 1899 886887 ~ 887829 (-)
G497 NA non-coding downstream 127485 761235 ~ 762243 (-)
G491 NA non-coding downstream 167934 632055 ~ 721794 (-)
G483 NA non-coding downstream 334628 554710 ~ 555100 (-)
G473 NA non-coding downstream 366726 522610 ~ 523002 (-)
LOC120566915 NA non-coding upstream 44809 1352254 ~ 1352983 (-)
G570 NA non-coding upstream 77888 1385333 ~ 1385594 (-)
G581 NA non-coding upstream 181003 1488448 ~ 1562974 (-)
G588 NA non-coding upstream 202945 1510390 ~ 1521486 (-)
G590 NA non-coding upstream 208681 1516126 ~ 1516675 (-)
G516 myhz1.2,LOC106938366,LOC104959125 other downstream 3385 885349 ~ 886343 (-)
G413 NA other downstream 450280 438657 ~ 439448 (-)
LOC120574930 LOC103372508,LOC108249786,LOC103470876,LOC102234899 other downstream 642755 233044 ~ 246973 (-)
G65 NA other downstream 657795 227526 ~ 231933 (-)
LOC120567035 NA other downstream 732490 154328 ~ 157238 (-)
G565 LOC105912973,LOC105893694,LOC105900140,LOC105893089 other upstream 52219 1359664 ~ 1360473 (-)
stab2 NA other upstream 162972 1470417 ~ 1576495 (-)
LOC120566421 NA other upstream 426101 1733546 ~ 1749692 (-)
G670 LOC103370005,LOC106529077 other upstream 741624 2049069 ~ 2050384 (-)
G974 NA other upstream 1551051 2858496 ~ 2859302 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location