G5242


Basic Information

Item Value
gene id G5242
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17051628 ~ 17051857 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU7080
tgtaaaccgagccctgggtatcctgctctgcctttgagaaaatgaaagctcagatgggccgatctggaatcttctccttatgaggtcataaggagcaaagttacctcccctttctctgctttgcccgcccagagaatttggcccacccatgagagagagagagacatcatgactttcaaacgagcaaagtggcagttggtcaaggccacacccccaccctccaccttgcc

Function

GO:

id name namespace
GO:0048856 anatomical structure development biological_process
GO:0032502 developmental process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7080 True 230 lncRNA 0.52 1 17051628 17051857

Neighbor

gene id symbol gene type direction distance location
notum1b notum,LOC103356199,LOC102201337,LOC102290801,LOC107090768 coding downstream 55987 16985394 ~ 16995641 (-)
tmc8 LOC103356194 coding downstream 85403 16957612 ~ 16966225 (-)
LOC120556225 NA coding downstream 94296 16946866 ~ 16957332 (-)
syngr2b syngr2,LOC107090770 coding downstream 105766 16936801 ~ 16945862 (-)
afmid afmid,LOC102792082 coding downstream 127030 16907096 ~ 16924598 (-)
npb npb coding upstream 101065 17152922 ~ 17154504 (-)
sgsh sgsh coding upstream 103874 17155731 ~ 17161156 (-)
LOC120559819 NA coding upstream 194692 17246549 ~ 17256447 (-)
LOC120569451 NA coding upstream 235109 17286966 ~ 17291473 (-)
si:ch211-196h16.12 LOC101466180,LOC100708390,LOC102193965,LOC103356221,LOC103465598 coding upstream 283080 17334937 ~ 17338618 (-)
G5202 NA non-coding downstream 79385 16967909 ~ 16972243 (-)
LOC120568012 NA non-coding downstream 130902 16917074 ~ 16920726 (-)
G5140 LOC103362533 non-coding downstream 208625 16762368 ~ 16843003 (-)
G5125 LOC103362543,LOC101066958,LOC101475774,LOC104921624,LOC102209940,LOC103384338 non-coding downstream 400102 16649045 ~ 16651526 (-)
G5079 mettl26 non-coding downstream 699160 16350067 ~ 16352468 (-)
G5261 NA non-coding upstream 8304 17060161 ~ 17060543 (-)
G5264 NA non-coding upstream 10053 17061910 ~ 17062119 (-)
G5265 NA non-coding upstream 11211 17063068 ~ 17065526 (-)
G5267 NA non-coding upstream 18320 17070177 ~ 17071728 (-)
G5269 NA non-coding upstream 19940 17071797 ~ 17074020 (-)
LOC120558720 NA other downstream 703706 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 1365989 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2147399 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 2332526 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 3009118 14018902 ~ 14042510 (-)
LOC120569099 NA other upstream 360196 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 658782 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 765650 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 784047 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 828011 17879868 ~ 17881759 (-)

Expression


Co-expression Network