G5269


Basic Information

Item Value
gene id G5269
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17071797 ~ 17074020 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU7109
CTCACACAGGAGTTCTACTATAATGGAGCTTCATTCAAAGCATTAGACTTCAGCACTTCAGGTACTCCTTAATCGGTTAGGGTCAGTTAATTAAATTGGGCTTTTATTTAACTGTGTATATGCAGAGCTTCTTCCATCCTCATGTACCACTGCAGTTTTGCAGTTTGTTGGGATGCAGCCTCCCACAGCTGGAGGTGCATCATCGCACAATAGATGGATCAAAGACATGAAGACTGAGGGTGgctgttgggggtgggggtggagaaAAGAGGGGGGGGAAGGGAAAAAACGGGGGGGGTAAAAAGGAGGCTGCTTTTCTGCCAGGCACTGGTTTATTTCCCCTGTGCCCAAACCCCAACCCCCCATAACCCCATCTACATACTGTACAAACAAAAAGCATGCCAGcaagcacatacatacatacacatccCCCTGCTGCCATGCCAGTGGGgcacaataaaaacacacatggaaaacacacaaaagtgCAATTGTAGTTATGTTTAAAGTGCTAAACTACTCGGTACGTGTGGACATTGAGCTTACTGTGCTTGCAAGGTTCAGAGGTTTTATTCCATACTTAACACATACATCAAATGTCTTAGATAAGAGCAACTAGCAAATGGAATTACTGCAGGTGCACAAAAGGTACCTGTAGTATCTATATCTATACCGGTGCAGCTCCTTCGTAATTATTTTTACTATCTGCAATTGCCTTAGTTTCAGATAGTATGGCTTACTTTTGATGGTATGGCCATTGCAGTTATAACCATTAATCActgtttgtaaatgttttcagtaaAGATGAGACACACTCTAGTTACaaaatgtgccagatttagctatgaacaaaaataaaagtaactgTTGGATCTGATGATAAGATAATCCAACTATGTTACActgataaattaaaaaaaggataGCATTTGTGCAATGACTACAGCTAatgattattgtttttattgattaatctgccacTTATTAGGACATCCTTGTGGCTGAATGGTTATATCACATAACCACAACGGACGATTGTTGCATGTCATATTTCTCTCTCTATTCCCTCGTTTCCTGTCTGTCGCTATACAATCACCTGTCCAAAGGcaaaaaattactttttcaaTTAACCGATCAGTTGTTTAaaattaatgacaaaaaaataatctcagCCTCTCAGTCTTAAATTGCATCctcaaattgtttttgttttaagatattattatatttaaggTATTAAGTTTAATATCATAAAAGACTGAAAAATAGCATCTGTTCATATTTGAGGAGCTTTAGCTTGTTGATTTTTGGTgcttttgctttaaaaaaaatattgttataGCTAGAGTAGTGGGTGTAGTGGTTGTTAGCACTGTGAAGTAGGACAGAATACTAAGTTTGGGGCTATTTCATCAAGGTTAGACAACAACAAACCGGACCTACACCACAGCATAAAATGGCaataaactctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctctctctctcaggccaTGTGTAAGTCACCCAGGTTAAGGATCATCTGCTGAGCAAAGGCATCGGCATTCATCTTAGGCGtatacacccacacatacacacacatgcacaaacacacacacacaaagtgccaGAGGTGTCCTTCCCATAATGCTTGCGGGGTGGTCGCTGCGGTGTGGTCAATGCCACAGCCACTGTTGCTACAACAGACAGCTTTTTTGCTGTGGCAGGCTGTATTTTTATGGAGCAAACGAAAGAACGCTGACAACTCAAGAGCAGAGCTGCTTACGGTTACAGTGGAGAGACAACACATAATAcacatactctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagaggatggGACAAGTGGTGGAGATGAGTAAAATACGGCTAGAAGACAAGAAAAGATAAGAAAGTGGGGAGAAAAGAGAGTGAGGAGTTTGTGGGATAGCAAGGTGAAGACAGGCTAGGTAAGAAAGGAGGAgaaggggagaggggaggggggtggtgGTGAAGGAGGACTGAAAGAATGCTGACGTCTCCAGAGCTGATTAGCGTTACAGCGGAGACATCACACCCACAGCCGAGAAAAATGCTGAGTATGGAGGGAGgaaggggtggggtgggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7109 True 2224 lncRNA 0.43 1 17071797 17074020

Neighbor

gene id symbol gene type direction distance location
notum1b notum,LOC103356199,LOC102201337,LOC102290801,LOC107090768 coding downstream 76156 16985394 ~ 16995641 (-)
tmc8 LOC103356194 coding downstream 105572 16957612 ~ 16966225 (-)
LOC120556225 NA coding downstream 114465 16946866 ~ 16957332 (-)
syngr2b syngr2,LOC107090770 coding downstream 125935 16936801 ~ 16945862 (-)
afmid afmid,LOC102792082 coding downstream 147199 16907096 ~ 16924598 (-)
npb npb coding upstream 78902 17152922 ~ 17154504 (-)
sgsh sgsh coding upstream 81711 17155731 ~ 17161156 (-)
LOC120559819 NA coding upstream 172529 17246549 ~ 17256447 (-)
LOC120569451 NA coding upstream 212946 17286966 ~ 17291473 (-)
si:ch211-196h16.12 LOC101466180,LOC100708390,LOC102193965,LOC103356221,LOC103465598 coding upstream 260917 17334937 ~ 17338618 (-)
G5267 NA non-coding downstream 69 17070177 ~ 17071728 (-)
G5265 NA non-coding downstream 6271 17063068 ~ 17065526 (-)
G5264 NA non-coding downstream 9678 17061910 ~ 17062119 (-)
G5261 NA non-coding downstream 11254 17060161 ~ 17060543 (-)
G5242 NA non-coding downstream 19940 17051628 ~ 17051857 (-)
G5268 NA non-coding upstream 2296 17076316 ~ 17079018 (-)
G5270 NA non-coding upstream 5141 17079161 ~ 17081397 (-)
G5361 pcyt2,LOC103356210 non-coding upstream 40955 17114975 ~ 17122218 (-)
G5375 LOC102309293 non-coding upstream 104379 17178399 ~ 17185803 (-)
G5376 NA non-coding upstream 108627 17182647 ~ 17186382 (-)
LOC120558720 NA other downstream 723875 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 1386158 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2167568 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 2352695 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 3029287 14018902 ~ 14042510 (-)
LOC120569099 NA other upstream 338033 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 636619 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 743487 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 761884 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 805848 17879868 ~ 17881759 (-)

Expression


Co-expression Network