epn3b (LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243)
Chromosome Information
Item |
Value |
chromosome id |
NC_053112.1 |
NCBI id |
CM020909.1
|
chromosome length |
48724115 |
location |
17817507 ~ 17835761 (-) |
genome version |
GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
Sequence
>TU7616
GTGATTGTGTATGCTGTGCGTGCGTGGCCTGCCGGTGCTGTATGCGTGTGTGGGGCTGCCTGagtgagagagcagagagggagtGAGTGAGCCGTGTGCTCTGGCTTATCCTTGTCCTATGCGGATTTCACCACTGACTGCCGGCCCCGAGCGACTCGCATCATCCAGGTTAGGCCTGGGTTTAGACGCGTTTAGACAACATTCCCATTCAAGGGAACACTCACTGTTCGGCTCCTCTCTAGGAGCGGAGGGAGATCATTGTGGTTGCACTGCTGCTTAGCCGATCCCAGCGGTGGGCATAGCATATTATCGGGACTTGGAGAGAGGAGATAGCGGAGAGGCGAGGATGCTCAGTGGACAAGGCGAGAGATGAGTAATGGGCAAGGGGCGTCCTATAACTCCTGACAGAGAAGAGGAGCCTTCAATGCCATatacctctcctctcctcctccagtccACGTTCCCCCTTTCACCCCTTCTCTTCACTTGTTGAGTGGTTTTTCTCCCCCACTTTCTATCCCtccacatcctccatcacccgTCACCATGACAACCTCAGCCCTGCGTCGGCAGGTGAAGAATATTGTGCACAACTATTCAGAAGCGGAGATCAAGGTTCGCGAGGCCACCTCGAACGACCCCTGGGGCCCATCTTCGTCTCTCATGTCAGAGATCGCTGACTTGACATTCAATGTGGTGGCGTTTGCTGAGGTCATGGGCATGGTGTGGAAACGCCTCAATGACAGCGGCAAGAACTGGAGGCACGTCTACAAGG
>XM_039817074.1
GGCTGCCTGagtgagagagcagagagggagtGAGTGAGCCGTGTGCTCTGGCTTATCCTTGTCCTATGCGGATTTCACCACTGACTGCCGGCCCCGAGCGACTCGCATCATCCAGGTTAGGCCTGGGTTTAGACGCGTTTAGACAACATTCCCATTCAAGGGAACACTCACTGTTCGGCTCCTCTCTAGGAGCGGAGGGAGATCATTGTGGTTGCACTGCTGCTTAGCCGATCCCAGCGGTGGGCATAGCATATTATCGGGACTTGGAGAGAGGAGATAGCGGAGAGGCGAGGATGCTCAGTGGACAAGGCGAGAGATGAGTAATGGGCAAGGGGCGTCCTATAACTCCTGACAGAGAAGAGGAGCCTTCAATGCCATatacctctcctctcctcctccagtccACGTTCCCCCTTTCACCCCTTCTCTTCACTTGTTGAGTGGTTTTTCTCCCCCACTTTCTATCCCtccacatcctccatcacccgTCACCATGACAACCTCAGCCCTGCGTCGGCAGGTGAAGAATATTGTGCACAACTATTCAGAAGCGGAGATCAAGGTTCGCGAGGCCACCTCGAACGACCCCTGGGGCCCATCTTCGTCTCTCATGTCAGAGATCGCTGACTTGACATTCAATGTGGTGGCGTTTGCTGAGGTCATGGGCATGGTGTGGAAACGCCTCAATGACAGCGGCAAGAACTGGAGGCACGTCTACAAGGCCCTGACTCTGTTGGATTACCTGCTGAAGACAGGATCAGAGAGAGTGGCCCAACAGTGCCGTGAAAATGCATTCACTATTCAGACGCTACGCGACTTCCAGTACATGGACCGTGACGGCAGAGATCAGGGGGCCAACGTGAGAGAAAAGGCACGCCAACTGGTGTGTCTCCTCCGGGACGAGGAGCGGCTCCGCCAGGAGAGGAGTCAAGCCCTAAAGACCAAGGAGCGAATGGCTGGGGGAGGCagtggagggggtgggggtggcagtgggggtgggggtgtgagtGTGTACGGAGGTATACCCCCTTCTTACCACCCAGGCAGGCGAACAAGCCAGCCCAGCATGGCTGTGCTGTACGGGGAGGAGTTCAGCCGATCCAGAGGCTCTCCGTCCTCCTTCAACTCCTCGTCATCGTCGCCTCGCGCCGCCTCGGACCTGGAGCAGGCTCGGCCTCAGACCAGCGGCGAGGAGGAGCTGCAGCTCCAGCTGGCTTTAGCCATGAGCAGGGAGGAGAGTCAGAAGGAGCAGTGCTGTCGCCAAGGAGACGAGTCTCTGTTACAGAAGGCTCTGgatgagagcaggagagagagtcAGTCGGGTACGCAGGAGTCGGCTATGCTGGACTTGGTGGACATATTTGGCCCCTCATCTGAGGCCCCACCTCAGCCTAGAGACCCTTGGAACTCTGCCCAACCCCCCGGTGACATCACCTCTGACCCCTGGGACTCTGTAGCGGTTCACTCCAGCACTCCTGTGATTGGTAGCCCGTGGACGGCCCCTCCCTTATCCTCCAACGCGTCCAATCCTTGGGCTCCATGTGCGGACTCACGCATAGACCCCTGGGAAGCAGCGCCTCTCTCCCCCAGTCCTATCAATCATGACTGGGACAGCCCAACAGATGGAGCAGGTGGGGAAGAGACAGATCAGTTTGCTGCACAGGAAGAAGATAATCCTAAACAGGATGTCCCTCAAGTGTCCTCCCCTCAACCTGCTAGTCCCACAGATGCAGAGCTGTTTGGGGTAATGGCAGACACTGACCCATTTGCAGATTCTAAGCCAAATCCATTTGGGGCTGACACTCCGGTAAAACCCCTGGTAAATGGACGAGAGTCGGCCAGCCCGGAGATGTTTGATCTGTCCCGGCTGGCACCCCCGCTCAGCGCCCCAACTCCACGTATGTGTCGAACCCCAGAGGCCTTCCTAGGAGCTACGGGGGCCTCGCTGGTCAATTTAGACGCTCTCATACCCTCCAACCCATCTAGCAAGATGCACAGCAATCCCTTCCTCTCAGGTCTGAGTGCTCCGTCTCCCACCAACCCCTTCCACTGCGACCAGCCTCGCCTCACCCTCAACCAAATGCGACCATGCTCTACATCCCCACTGCCCCCACACATGCTCTCCTACAGCCCGTCGCTGCCCCTCCCTCTGCCCCACCAGCCACCcatcctcccctcctctctcacaCAACCTCCCGCTGGACTCCTGGACCTTCCCTCCAACCTCCCACAGCCCCTGCTCCCCCTTTCTCCGCGACCACCGCAGCGCActcagtcacagacacacagccacaACCCCTTCCTCTGAGACCTTCTGCATCTTTCCAGCTCTGGTCTGCAGAGGGAGACAACAGAATGAACTCTATTTGGATTAATCTATGCCGACTACAATAAAACTAGTTTAAATGAGCCTGAACTGGACTGCGGATCCTGGTCTGATGTCATCGTGCACACTTGAAGCGGATACAACTCGGACTggatgtatttgtgtctgtctgAAGACACATCAGCTGCTATATAACCTGAACTCTTGATTAAAAGCTAactcacagaaaaacacacacacgcactcaggCGCACTTAAAGGTGCAtagacacaaacatgcacacaccacCAAACTAACAGGGTGTGCCTCCACTGTCCCTTCGATGCCTTTTCCCCATCAACAGTGACAACTCCGAGCACCCTTTGACCACAGAGCCAGAACTGTTTCTTTAGGAGATCAGGATGAGGCCACATACTTTGATTTTCCACCAAGATTCACCAGGATCCTTACCCCTGCTGCTTCACCGACAAAAGCATGAATGCATCCCACCCCCAAGACTCGAAACTATTCTATTCTGCTGAGCACCTGAGACCAGTTCTTCAAACAAGTCCTCTTTTTCTGATGAGTCAAATATCTTGAGCTTTGTTGGCACAATTGAATCACCGGAGAAAGCCCAAAAGTGTGTTACTGTTAGGTTCAAGACAGCATTCAGCACTGTTCAAGAACAAATTGACTCAGGTATTCCTTCCCACATTTAAGTCATGACATATTTTGCATTGCCTTGTTACCTTGCAAGCTCAACAGCATCTGGTCCTAAGTTACTTATGTTATTTGTCCTAGTGGCCCCTAAAGAATCTAGGTGGATTCAAAACTGGATTAAACCAGCCTAAGCCAAACCTCATTGTCTCAATCTGGACCTAAACTGATCACTGATTGTACCCTATCGGACCCGTGTGCCTGACTCTACAGCTGACCCACAATGCATTCCCAGCTGGTTTATATTGATTGATATGAAGGAGGACCTCAGGAAGACCGCTCTGTCCCTCCTCCGGTGAAATTCAACCTTAGTCAATGGAAAAGCATTAGTCTACAGAAAAAAGAGGTGGGAGGAGTAAAAGAAATATGAATAGAAATAAGGTGAAAAGATTACAAAAGATAAAGTGATGTGTTGAGCAGTAGCTCCTCTATTGTGCTAAATATTTACTTCTGTGTTTGGAACAAGAGAGGAGTTGTTTGGTCGTCACTGCACTGAACCTGGACTGAATGTGAAATCCCTGCCTATAGATACACACAGGCTTAGTACATATGTATTTAACAGAAAGATACCTATAAAGTATTATAAAACATATACCAATAAATGAATGGTGTTTGCATTATAA
>XM_039817081.1
GGCTGCCTGagtgagagagcagagagggagtGAGTGAGCCGTGTGCTCTGGCTTATCCTTGTCCTATGCGGATTTCACCACTGACTGCCGGCCCCGAGCGACTCGCATCATCCAGGTTAGGCCTGGGTTTAGACGCGTTTAGACAACATTCCCATTCAAGGGAACACTCACTGTTCGGCTCCTCTCTAGGAGCGGAGGGAGATCATTGTGGTTGCACTGCTGCTTAGCCGATCCCAGCGGTGGGCATAGCATATTATCGGGACTTGGAGAGAGGAGATAGCGGAGAGGCGAGGATGCTCAGTGGACAAGGCGAGAGATGAGTAATGGGCAAGGGGCGTCCTATAACTCCTGACAGAGAAGAGGAGCCTTCAATGCCATatacctctcctctcctcctccagtccACGTTCCCCCTTTCACCCCTTCTCTTCACTTGTTGAGTGGTTTTTCTCCCCCACTTTCTATCCCtccacatcctccatcacccgTCACCATGACAACCTCAGCCCTGCGTCGGCAGGTGAAGAATATTGTGCACAACTATTCAGAAGCGGAGATCAAGGTTCGCGAGGCCACCTCGAACGACCCCTGGGGCCCATCTTCGTCTCTCATGTCAGAGATCGCTGACTTGACATTCAATGTGGTGGCGTTTGCTGAGGTCATGGGCATGGTGTGGAAACGCCTCAATGACAGCGGCAAGAACTGGAGGCACGTCTACAAGGCCCTGACTCTGTTGGATTACCTGCTGAAGACAGGATCAGAGAGAGTGGCCCAACAGTGCCGTGAAAATGCATTCACTATTCAGACGCTACGCGACTTCCAGTACATGGACCGTGACGGCAGAGATCAGGGGGCCAACGTGAGAGAAAAGGCACGCCAACTGGTGTGTCTCCTCCGGGACGAGGAGCGGCTCCGCCAGGAGAGGAGTCAAGCCCTAAAGACCAAGGAGCGAATGGCTGGGGGAGGCagtggagggggtgggggtggcagtgggggtgggggtgtgagtGTGTACGGAGGTATACCCCCTTCTTACCACCCAGGCAGGCGAACAAGCCAGCCCAGCATGGCTGTGCTGTACGGGGAGGAGTTCAGCCGATCCAGAGGCTCTCCGTCCTCCTTCAACTCCTCGTCATCGTCGCCTCGCGCCGCCTCGGACCTGGAGCAGGCTCGGCCTCAGACCAGCGGCGAGGAGGAGCTGCAGCTCCAGCTGGCTTTAGCCATGAGCAGGGAGGAGAGTCAGAAGGAGCAGTGCTGTCGCCAAGGAGACGAGTCTCTGTTACAGAAGGCTCTGgatgagagcaggagagagagtcAGTCGGGTACGCAGGAGTCGGCTATGCTGGACTTGGTGGACATATTTGGCCCCTCATCTGAGGCCCCACCTCAGCCTAGAGACCCTTGGAACTCTGCCCAACCCCCCGGTGACATCACCTCTGACCCCTGGGACTCTGTAGCGGTTCACTCCAGCACTCCTGTGATTGGTAGCCCGTGGACGGCCCCTCCCTTATCCTCCAACGCGTCCAATCCTTGGGCTCCATGTGCGGACTCACGCATAGACCCCTGGGAAGCAGCGCCTCTCTCCCCCAGTCCTATCAATCATGACTGGGACAGCCCAACAGATGGAGGTGGGGAAGAGACAGATCAGTTTGCTGCACAGGAAGAAGATAATCCTAAACAGGATGTCCCTCAAGTGTCCTCCCCTCAACCTGCTAGTCCCACAGATGCAGAGCTGTTTGGGGTAATGGCAGACACTGACCCATTTGCAGATTCTAAGCCAAATCCATTTGGGGCTGACACTCCGGTAAAACCCCTGGTAAATGGACGAGAGTCGGCCAGCCCGGAGATGTTTGATCTGTCCCGGCTGGCACCCCCGCTCAGCGCCCCAACTCCACGTATGTGTCGAACCCCAGAGGCCTTCCTAGGAGCTACGGGGGCCTCGCTGGTCAATTTAGACGCTCTCATACCCTCCAACCCATCTAGCAAGATGCACAGCAATCCCTTCCTCTCAGGTCTGAGTGCTCCGTCTCCCACCAACCCCTTCCACTGCGACCAGCCTCGCCTCACCCTCAACCAAATGCGACCATGCTCTACATCCCCACTGCCCCCACACATGCTCTCCTACAGCCCGTCGCTGCCCCTCCCTCTGCCCCACCAGCCACCcatcctcccctcctctctcacaCAACCTCCCGCTGGACTCCTGGACCTTCCCTCCAACCTCCCACAGCCCCTGCTCCCCCTTTCTCCGCGACCACCGCAGCGCActcagtcacagacacacagccacaACCCCTTCCTCTGAGACCTTCTGCATCTTTCCAGCTCTGGTCTGCAGAGGGAGACAACAGAATGAACTCTATTTGGATTAATCTATGCCGACTACAATAAAACTAGTTTAAATGAGCCTGAACTGGACTGCGGATCCTGGTCTGATGTCATCGTGCACACTTGAAGCGGATACAACTCGGACTggatgtatttgtgtctgtctgAAGACACATCAGCTGCTATATAACCTGAACTCTTGATTAAAAGCTAactcacagaaaaacacacacacgcactcaggCGCACTTAAAGGTGCAtagacacaaacatgcacacaccacCAAACTAACAGGGTGTGCCTCCACTGTCCCTTCGATGCCTTTTCCCCATCAACAGTGACAACTCCGAGCACCCTTTGACCACAGAGCCAGAACTGTTTCTTTAGGAGATCAGGATGAGGCCACATACTTTGATTTTCCACCAAGATTCACCAGGATCCTTACCCCTGCTGCTTCACCGACAAAAGCATGAATGCATCCCACCCCCAAGACTCGAAACTATTCTATTCTGCTGAGCACCTGAGACCAGTTCTTCAAACAAGTCCTCTTTTTCTGATGAGTCAAATATCTTGAGCTTTGTTGGCACAATTGAATCACCGGAGAAAGCCCAAAAGTGTGTTACTGTTAGGTTCAAGACAGCATTCAGCACTGTTCAAGAACAAATTGACTCAGGTATTCCTTCCCACATTTAAGTCATGACATATTTTGCATTGCCTTGTTACCTTGCAAGCTCAACAGCATCTGGTCCTAAGTTACTTATGTTATTTGTCCTAGTGGCCCCTAAAGAATCTAGGTGGATTCAAAACTGGATTAAACCAGCCTAAGCCAAACCTCATTGTCTCAATCTGGACCTAAACTGATCACTGATTGTACCCTATCGGACCCGTGTGCCTGACTCTACAGCTGACCCACAATGCATTCCCAGCTGGTTTATATTGATTGATATGAAGGAGGACCTCAGGAAGACCGCTCTGTCCCTCCTCCGGTGAAATTCAACCTTAGTCAATGGAAAAGCATTAGTCTACAGAAAAAAGAGGTGGGAGGAGTAAAAGAAATATGAATAGAAATAAGGTGAAAAGATTACAAAAGATAAAGTGATGTGTTGAGCAGTAGCTCCTCTATTGTGCTAAATATTTACTTCTGTGTTTGGAACAAGAGAGGAGTTGTTTGGTCGTCACTGCACTGAACCTGGACTGAATGTGAAATCCCTGCCTATAGATACACACAGGCTTAGTACATATGTATTTAACAGAAAGATACCTATAAAGTATTATAAAACATATACCAATAAATGAATGGTGTTTGCATTATAA
Function
NR:
description |
PREDICTED: epsin-3-like isoform X2 |
GO: NA
KEGG:
id |
description |
K12471
|
EPN; epsin |
RNA
RNA id |
representative |
length |
rna type |
GC content |
exon number |
start site |
end site |
TU7616 |
False |
775 |
TUCP |
0.55 |
3 |
17830692 |
17835761 |
XM_039817074.1 |
True |
3646 |
mRNA |
0.53 |
12 |
17817507 |
17835708 |
XM_039817081.1 |
False |
3643 |
mRNA |
0.53 |
12 |
17817507 |
17835708 |
Neighbor
gene id |
symbol |
gene type |
direction |
distance |
location |
b3gntl1 |
b3gntl1,LOC105924764
|
coding |
downstream |
4932 |
17794352 ~ 17812575 (-) |
LOC120563097 |
LOC104965080,LOC103373413,LOC102785880,LOC100703819,LOC102203376
|
coding |
downstream |
28527 |
17782589 ~ 17788980 (-) |
LOC120560193 |
NA
|
coding |
downstream |
38230 |
17773284 ~ 17779277 (-) |
LOC120560200 |
NA
|
coding |
downstream |
49332 |
17766923 ~ 17768175 (-) |
LOC120556506 |
NA
|
coding |
downstream |
53698 |
17757669 ~ 17763809 (-) |
tecrb |
tecr,LOC107390378
|
coding |
upstream |
703902 |
18539663 ~ 18552834 (-) |
tmed1b |
LOC104964575,LOC104925388,LOC103362227,LOC101073760
|
coding |
upstream |
788347 |
18624108 ~ 18629125 (-) |
LOC120571862 |
NA
|
coding |
upstream |
810398 |
18646159 ~ 18648400 (-) |
LOC120557593 |
LOC103362234
|
coding |
upstream |
839647 |
18675408 ~ 18702209 (-) |
LOC120567401 |
nxnl1,LOC103362235,LOC101486728
|
coding |
upstream |
866677 |
18702438 ~ 18705754 (-) |
G5616 |
NA
|
non-coding |
downstream |
35494 |
17781780 ~ 17782013 (-) |
LOC120560178 |
NA
|
non-coding |
downstream |
77660 |
17738072 ~ 17739847 (-) |
G5608 |
NA
|
non-coding |
downstream |
82756 |
17703216 ~ 17734751 (-) |
LOC120560186 |
NA
|
non-coding |
downstream |
117118 |
17699260 ~ 17700389 (-) |
G5522 |
NA
|
non-coding |
downstream |
171842 |
17617187 ~ 17645665 (-) |
G5638 |
NA
|
non-coding |
upstream |
16903 |
17852664 ~ 17852981 (-) |
G5666 |
NA
|
non-coding |
upstream |
131566 |
17967327 ~ 17968130 (-) |
G5679 |
NA
|
non-coding |
upstream |
165664 |
18001425 ~ 18003156 (-) |
LOC120563150 |
NA
|
non-coding |
upstream |
169474 |
18005235 ~ 18008724 (-) |
G5716 |
NA
|
non-coding |
upstream |
183862 |
18019623 ~ 18024037 (-) |
LOC120560175 |
NA
|
other |
downstream |
103609 |
17710639 ~ 17713898 (-) |
LOC120569099 |
NA
|
other |
downstream |
396409 |
17412053 ~ 17421098 (-) |
LOC120558720 |
NA
|
other |
downstream |
1469585 |
16345718 ~ 16347922 (-) |
sdk1a |
sdk1,LOC104962449,LOC103362694
|
other |
downstream |
2131868 |
15426544 ~ 15685639 (-) |
ubl5 |
ubl5
|
other |
downstream |
2913278 |
14901146 ~ 14904229 (-) |
LOC120556682 |
NA
|
other |
upstream |
143 |
17835904 ~ 17848037 (-) |
LOC120556582 |
NA
|
other |
upstream |
44107 |
17879868 ~ 17881759 (-) |
G5930 |
LOC102307335,LOC101466373
|
other |
upstream |
1049207 |
18884968 ~ 18890220 (-) |
mcrip2 |
mcrip2,LOC104963804
|
other |
upstream |
1136209 |
18971970 ~ 18982318 (-) |
cxcl12b |
cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533
|
other |
upstream |
1187455 |
19023216 ~ 19037081 (-) |
Expression