LOC120556582


Basic Information

Item Value
gene id LOC120556582
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17879868 ~ 17881759 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU7664
CTTACACATCCTGATAGACATGACAGTGATGCCATAGAAGACATGTGATACCTCAGAGCATGGCATGCCCGCTAAAAGCTCACTGCAGCTACTGCACGTACACAGGGAAATCTGATACAGTAATGTGATGAGTGGCCCGGAGATAAATAACTGTAATGTAGCCTGTCTTGTAGgactgctgctggaaacagctgTAGGGCTCCGGGCCTGCTCTCCTAAATTACACAACAGCGgagggttacacacacacacacacacacacacacactgcctgccTGTTCCCTTCAGCTCACCGACCTTGAGCAGATCCAGGGGATGTGTGCAGCATGCTGCTCCGCAAGACGCCAGCCCACCGAAATACCACCGCGACATCCGTTTCTCCGTCATGGTTCCGTTCTCTGACGTTGTCCGATGCAGCTACAGCGGTGACTTCCTTCTTCCCAGTCCGCCTTCGACACGCTGCGCGCCTGCTCTGTCCGCTTCCTGGCCCGCACGGTGTACCGCTGGCAGTAGCTTGTGGTCTACAGGACGCGGATAACCTCGTTAATCTTCAAACATTCCGATAAGAGACTGCACCACGGACCGGGGGACTTTGGGCTCCTGTAGcatcgcgcacacacacgccacattacgtgtgtgtgtatgtgtgtgtgtacacgtgcgtgcgcgcgcgcgctgTCTGCTGTGTTTGGGCCACGCGGAGAAAAGCGTAGAAGAGAGCAGCCAATTGTCTCTGTGAACGGCGGAGCTGCCTACCCGCCCGCCCCGGGTTTCGAGATcAGGGCAGCAGAGACTACATAAAGACACTGTTGGATttatatcttttctttttcctggcTGGCTGTTGGCACCATGCTGTGTCCGTTTCTGTAATAATGTCTCCAATAAAGTTGTCTATTAAATCAAGTGTATGTTTTTGAACAAAAAACAGGTTATACAACACTGTTGTAACACCTCAACCAAAGCAACTACAAAGTAAATAAGGGCTTATCTTATAGGTGTaacattttgtacatttttagatGAGCACCGATTTTAGCAGAAAGATTAACAGTCAT
>XR_005638874.1
atgtgtgtgtgtacacgtgcgtgcgcgcgcgcgctgTCTGCTGTGTTTGGGCCACGCGGAGAAAAGCGTAGAAGAGAGCAGCCAATTGTCTCTGTGAACGGCGGAGCTGCCTACCCGCCCGCCCCGGGTTTCGAGATcAGGGCAGCAGAGACTACATAAAGACACTGTTGGATttatatcttttctttttcctggcTGGCTGTTGGCACCATGCTGTGTCCGTTTCTGTAATAATGTCTCCAATAAAGTTGTCTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7664 True 1058 TUCP 0.51 2 17879868 17881759
XR_005638874.1 False 260 lncRNA 0.52 2 17880024 17881117

Neighbor

gene id symbol gene type direction distance location
b3gntl1 b3gntl1,LOC105924764 coding downstream 67293 17794352 ~ 17812575 (-)
LOC120563097 LOC104965080,LOC103373413,LOC102785880,LOC100703819,LOC102203376 coding downstream 90888 17782589 ~ 17788980 (-)
LOC120560193 NA coding downstream 100591 17773284 ~ 17779277 (-)
LOC120560200 NA coding downstream 111693 17766923 ~ 17768175 (-)
LOC120556506 NA coding downstream 116059 17757669 ~ 17763809 (-)
tecrb tecr,LOC107390378 coding upstream 657904 18539663 ~ 18552834 (-)
tmed1b LOC104964575,LOC104925388,LOC103362227,LOC101073760 coding upstream 742349 18624108 ~ 18629125 (-)
LOC120571862 NA coding upstream 764400 18646159 ~ 18648400 (-)
LOC120557593 LOC103362234 coding upstream 793649 18675408 ~ 18702209 (-)
LOC120567401 nxnl1,LOC103362235,LOC101486728 coding upstream 820679 18702438 ~ 18705754 (-)
G5638 NA non-coding downstream 26887 17852664 ~ 17852981 (-)
G5616 NA non-coding downstream 97855 17781780 ~ 17782013 (-)
LOC120560178 NA non-coding downstream 140021 17738072 ~ 17739847 (-)
G5608 NA non-coding downstream 145117 17703216 ~ 17734751 (-)
LOC120560186 NA non-coding downstream 179479 17699260 ~ 17700389 (-)
G5666 NA non-coding upstream 85568 17967327 ~ 17968130 (-)
G5679 NA non-coding upstream 119666 18001425 ~ 18003156 (-)
LOC120563150 NA non-coding upstream 123476 18005235 ~ 18008724 (-)
G5716 NA non-coding upstream 137864 18019623 ~ 18024037 (-)
LOC120566281 NA non-coding upstream 213151 18094910 ~ 18104342 (-)
LOC120556682 NA other downstream 31831 17835904 ~ 17848037 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other downstream 44107 17817507 ~ 17835761 (-)
LOC120560175 NA other downstream 165970 17710639 ~ 17713898 (-)
LOC120569099 NA other downstream 458770 17412053 ~ 17421098 (-)
LOC120558720 NA other downstream 1531946 16345718 ~ 16347922 (-)
G5930 LOC102307335,LOC101466373 other upstream 1003209 18884968 ~ 18890220 (-)
mcrip2 mcrip2,LOC104963804 other upstream 1090211 18971970 ~ 18982318 (-)
cxcl12b cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533 other upstream 1141457 19023216 ~ 19037081 (-)
G6084 NA other upstream 1607829 19489588 ~ 19545927 (-)
LOC120569510 NA other upstream 1883134 19764893 ~ 19765387 (-)

Expression


Co-expression Network