G5666


Basic Information

Item Value
gene id G5666
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17967327 ~ 17968130 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU7677
ACATAATTCAGTTTAATTGGATCCACAGAGACAAATGAGACACAACAATTTGGCTTTaatataaaactttttttgcaTCCTGTCATGACATTGTTTGCTTTGGGCCCCCACTTACAATTGCAACATCTAAATAAAAGGCAGGTACAATCatgttttgtgtctttattCAATATAATTCTTCATGTCTATTCTCATTCTCAGCTGAACTGTTCCCTCCACCCACGTCTTTGTCTTTAGAATACCGGCATTCACATTTATCAATATTTACAGTGCTTACTTGTCGCTTTTACATTTCaaactatatatttgtttaCCATCCTTGATGAAAAGTTCATCAGAAATCCCTTTGTGAAAATCCTTGTTGGCTCTCGAGTGACTGAACTTGATCATATTTGGAAAATACCAaaatttaaaagtttaaaaatgcCAATCCATTAATTTACCCATTTTCTTACTCCAAAATTATGAAAGTGGTTCTGTGTGTAGTATGAGCCCTGATCCGATCTGCAGaagaaaataactaaatatataataagaaataaATATCAGGTGGTTACTCTTTTGTTAGTCTATATCattgacgttccacttcaggAATTCGCTGATGTCCGtctccttccgctttctttgtgttggaattttaaactccggtggatttatgaggactatggttaactgctcctcagatctctgcagggtaaattgagacagctagctagacttctgtccaatctgagttttcactAGCACAACAATTTTGCaccggctccgtgcggagcttagcaccacccatgacgattgtga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7677 True 804 lncRNA 0.41 1 17967327 17968130

Neighbor

gene id symbol gene type direction distance location
b3gntl1 b3gntl1,LOC105924764 coding downstream 154752 17794352 ~ 17812575 (-)
LOC120563097 LOC104965080,LOC103373413,LOC102785880,LOC100703819,LOC102203376 coding downstream 178347 17782589 ~ 17788980 (-)
LOC120560193 NA coding downstream 188050 17773284 ~ 17779277 (-)
LOC120560200 NA coding downstream 199152 17766923 ~ 17768175 (-)
LOC120556506 NA coding downstream 203518 17757669 ~ 17763809 (-)
tecrb tecr,LOC107390378 coding upstream 571533 18539663 ~ 18552834 (-)
tmed1b LOC104964575,LOC104925388,LOC103362227,LOC101073760 coding upstream 655978 18624108 ~ 18629125 (-)
LOC120571862 NA coding upstream 678029 18646159 ~ 18648400 (-)
LOC120557593 LOC103362234 coding upstream 707278 18675408 ~ 18702209 (-)
LOC120567401 nxnl1,LOC103362235,LOC101486728 coding upstream 734308 18702438 ~ 18705754 (-)
G5638 NA non-coding downstream 114346 17852664 ~ 17852981 (-)
G5616 NA non-coding downstream 185314 17781780 ~ 17782013 (-)
LOC120560178 NA non-coding downstream 227480 17738072 ~ 17739847 (-)
G5608 NA non-coding downstream 232576 17703216 ~ 17734751 (-)
LOC120560186 NA non-coding downstream 266938 17699260 ~ 17700389 (-)
G5679 NA non-coding upstream 33295 18001425 ~ 18003156 (-)
LOC120563150 NA non-coding upstream 37105 18005235 ~ 18008724 (-)
G5716 NA non-coding upstream 51493 18019623 ~ 18024037 (-)
LOC120566281 NA non-coding upstream 126780 18094910 ~ 18104342 (-)
G5733 NA non-coding upstream 377124 18345254 ~ 18350149 (-)
LOC120556582 NA other downstream 85568 17879868 ~ 17881759 (-)
LOC120556682 NA other downstream 119290 17835904 ~ 17848037 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other downstream 131566 17817507 ~ 17835761 (-)
LOC120560175 NA other downstream 253429 17710639 ~ 17713898 (-)
LOC120569099 NA other downstream 546229 17412053 ~ 17421098 (-)
G5930 LOC102307335,LOC101466373 other upstream 916838 18884968 ~ 18890220 (-)
mcrip2 mcrip2,LOC104963804 other upstream 1003840 18971970 ~ 18982318 (-)
cxcl12b cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533 other upstream 1055086 19023216 ~ 19037081 (-)
G6084 NA other upstream 1521458 19489588 ~ 19545927 (-)
LOC120569510 NA other upstream 1796763 19764893 ~ 19765387 (-)

Expression


Co-expression Network