G5679


Basic Information

Item Value
gene id G5679
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 18001425 ~ 18003156 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU7694
CTTTGTGATATAGTCATGGCTGTCCGGTCCAAACAGATCCAGGCTACGTGTGCCATACAGAAGGCCGCGGTCGTGGGAGCTCCGGGAGCTGAGGGTGTCAAAGATCTCCCCCAGCAGATCCATCTCCTCCGAGTCACACAGTAAGGAATCTTCCCCCTCATCTTTATCCTTCTCTAGCTCAGAGTCCTCGACCACAGGCCCAGACACAGCTCTGATGCACAGAGATAAGAAACAGGAATGGCACAAGCAAGAAAATACATGCTGtgtattcttgtctttttccTGGGCTTTTCTACATTTCTCCATCTCTCAGTTTCTCTCACCCATCCCATGTGTCTCCAGAGTCCTGCATGTCCTCCTCGTTTCCAGTAACCCTAAGTTTGTGAGCAGGCCGACGGGGACGTGACTGACATGAGGAAAAATAGAATAACAAAGCAAAGGGATAGCAACGCAACATTCACCCAACAAGAAATGGAGCAGTAAAAGTAGCAACAATTGCACAAAGAAGCAGTGCAGGACAGTAGCATATGAATATTAGGTCATGAGAAGGATTTATGTGGATGGTATCTGTTCCAAtttcataaaatatttaaaatagacATGGGATTGTTTTGAAACAGATCTCACCCTCCCAAAGTGTTGTGTGATTGGCAGGCGGTTCTGCAAGCAGTCAGATTTAGCACGGCGGTGCGACACAGATCCACCTCTTTGTAGGGTGTGTTGTTCATTGTGgccTTGTGCATCAGCAGGTTTTTCAAACCTGACTTGGTGAGACCTTTGGCCTGGGAGAGATCAAAACATTAGTTGTTTTGGTAATGCAGATTGAATTCACAGCTGAAAACACCTTGGTTTATACCTTATACTCACCCCCATGTTTGCTTTGGACTTCATGTTAAGGATGAGTGCTCCTCCCCCTTTCTGTCAAAAGTACAAGTGCATCTGTGTTGCACTTTGCGACAAGACTGGAACAAACTTCAAACTATTTCACTGAAGATTAAAATAACTTACCTTTAAATGACCAACCAACTGTTGATACGATTTGCTTCTCCctatataaacagacagaaacaaaatagtGGCGAGTAATAGACAtttgcacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacctgcagctgTTTCACACTTTAAGATTTCCTCCTCAAAGAGATCATCTGGTTCCTTCTCTTTGTTCAGAATATCCAAGCGACCATCAATgaactaaaaacaaaaacaattttttttttatttattattattattcaatgAAAATATGTAAGAATGCTCACTCATTTgcaacatttttctttaattctCTTTCAACCAGCCCTTCACCAGCGTTATAATTGCAGTATATGTCCAGCAGAGGGCACAGTGTGTACCTGTTTGAAGGACTGTAAATGAATGGCACTCTTTAGGAACTGCCTCATACTGGCAGACTTGTGATCTACAAACAGTTCCTCACTGAACCATATCTCACCCTCCtgcaaagaaagagagagagagaggcaaacaAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7694 True 1575 lncRNA 0.43 2 18001425 18003156

Neighbor

gene id symbol gene type direction distance location
b3gntl1 b3gntl1,LOC105924764 coding downstream 188850 17794352 ~ 17812575 (-)
LOC120563097 LOC104965080,LOC103373413,LOC102785880,LOC100703819,LOC102203376 coding downstream 212445 17782589 ~ 17788980 (-)
LOC120560193 NA coding downstream 222148 17773284 ~ 17779277 (-)
LOC120560200 NA coding downstream 233250 17766923 ~ 17768175 (-)
LOC120556506 NA coding downstream 237616 17757669 ~ 17763809 (-)
tecrb tecr,LOC107390378 coding upstream 536507 18539663 ~ 18552834 (-)
tmed1b LOC104964575,LOC104925388,LOC103362227,LOC101073760 coding upstream 620952 18624108 ~ 18629125 (-)
LOC120571862 NA coding upstream 643003 18646159 ~ 18648400 (-)
LOC120557593 LOC103362234 coding upstream 672252 18675408 ~ 18702209 (-)
LOC120567401 nxnl1,LOC103362235,LOC101486728 coding upstream 699282 18702438 ~ 18705754 (-)
G5666 NA non-coding downstream 33295 17967327 ~ 17968130 (-)
G5638 NA non-coding downstream 148444 17852664 ~ 17852981 (-)
G5616 NA non-coding downstream 219412 17781780 ~ 17782013 (-)
LOC120560178 NA non-coding downstream 261578 17738072 ~ 17739847 (-)
G5608 NA non-coding downstream 266674 17703216 ~ 17734751 (-)
LOC120563150 NA non-coding upstream 2079 18005235 ~ 18008724 (-)
G5716 NA non-coding upstream 16467 18019623 ~ 18024037 (-)
LOC120566281 NA non-coding upstream 91754 18094910 ~ 18104342 (-)
G5733 NA non-coding upstream 342098 18345254 ~ 18350149 (-)
G5728 NA non-coding upstream 417490 18420646 ~ 18422700 (-)
LOC120556582 NA other downstream 119666 17879868 ~ 17881759 (-)
LOC120556682 NA other downstream 153388 17835904 ~ 17848037 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other downstream 165664 17817507 ~ 17835761 (-)
LOC120560175 NA other downstream 287527 17710639 ~ 17713898 (-)
LOC120569099 NA other downstream 580327 17412053 ~ 17421098 (-)
G5930 LOC102307335,LOC101466373 other upstream 881812 18884968 ~ 18890220 (-)
mcrip2 mcrip2,LOC104963804 other upstream 968814 18971970 ~ 18982318 (-)
cxcl12b cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533 other upstream 1020060 19023216 ~ 19037081 (-)
G6084 NA other upstream 1486432 19489588 ~ 19545927 (-)
LOC120569510 NA other upstream 1761737 19764893 ~ 19765387 (-)

Expression


Co-expression Network