G588


Basic Information

Item Value
gene id G588
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 1510390 ~ 1521486 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU790
aagtcaataacgcagcatttcattgttattttaacagagcattagtaaaatgctcctaggctcgtgcacagcgcgcacacactatgcttgttacacacacagggacgcacagcagcacacacacacacacacacacacacacacacacacacacacacacacatgcagaagattacaaataaaaatattacggtgcaaatcctccatcataacagcaatgctccaaggtccaaacgtgcctggcttttaaagggaatgggagatgatctctgattggttgattgcatgttacgcccaaaacacacctctgattaatgaagacactaaggacaaccctttaggaccaggcgcccggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU790 True 356 lncRNA 0.37 2 1510390 1521486

Neighbor

gene id symbol gene type direction distance location
tomm20b tomm20,LOC103375291,LOC103383373,LOC100703030,LOC108247505 coding downstream 51523 1451999 ~ 1458867 (-)
LOC120566769 NA coding downstream 932398 572764 ~ 577992 (-)
tbce NA coding downstream 1080406 404857 ~ 429984 (-)
LOC120560351 NA coding downstream 1180357 319682 ~ 330033 (-)
LOC120560232 LOC103372506 coding downstream 1203760 277480 ~ 306630 (-)
LOC120560873 LOC104946033 coding upstream 104044 1625530 ~ 1629159 (-)
LOC120566021 NA coding upstream 575883 2097369 ~ 2106501 (-)
LOC120566031 NA coding upstream 607087 2128573 ~ 2135521 (-)
sde2 NA coding upstream 730566 2252052 ~ 2266353 (-)
LOC120566094 LOC103375177,LOC102205209,LOC101467885,LOC100705917 coding upstream 749974 2271460 ~ 2302586 (-)
G570 NA non-coding downstream 124796 1385333 ~ 1385594 (-)
LOC120566915 NA non-coding downstream 157407 1352254 ~ 1352983 (-)
G513 NA non-coding downstream 196912 1220503 ~ 1313478 (-)
G591 NA non-coding upstream 14760 1536246 ~ 1536655 (-)
G583 NA non-coding upstream 26546 1548032 ~ 1575776 (-)
G593 NA non-coding upstream 60497 1581983 ~ 1599108 (-)
LOC120566920 NA non-coding upstream 88046 1609532 ~ 1675981 (-)
G457 NA non-coding upstream 94404 1615890 ~ 1689438 (-)
G565 LOC105912973,LOC105893694,LOC105900140,LOC105893089 other downstream 149917 1359664 ~ 1360473 (-)
G519 NA other downstream 535563 966236 ~ 974827 (-)
G516 myhz1.2,LOC106938366,LOC104959125 other downstream 624047 885349 ~ 886343 (-)
G413 NA other downstream 1070942 438657 ~ 439448 (-)
LOC120574930 LOC103372508,LOC108249786,LOC103470876,LOC102234899 other downstream 1263417 233044 ~ 246973 (-)
LOC120566421 NA other upstream 212060 1733546 ~ 1749692 (-)
G670 LOC103370005,LOC106529077 other upstream 527583 2049069 ~ 2050384 (-)
G974 NA other upstream 1337010 2858496 ~ 2859302 (-)
G1003 tmem178a other upstream 1442254 2963740 ~ 2964320 (-)
G1008 tmem178a,LOC102307988 other upstream 1453752 2975238 ~ 2978115 (-)

Expression


Co-expression Network