G5921 (LOC103372008)


Basic Information

Item Value
gene id G5921
gene name LOC103372008
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 18836277 ~ 18857539 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU8074
GCCAAGTCAAATGTATTTCCATATCTTTCACCCTTTGTCTGGTATCTGTCTTCTCTGCACCCTTGCACAATTTTCTAGACTTATGTAGAGAACTTCTAAGAAAGTAAGAGTTGAACAGCCACTTACCCTTCAGTTTCTCCACCACACTCTGCCCGGCTCTCTCCGCCACCTGCCCGTCCTCCCTTTGGTAATGGTCATCCAGGAATCGGGCAGTAGCTTCTGACAGGTGGACCTTGCCCGCCACGCCCAGCTGCTCCATCAAGTTAGCCAGATTGACATCGTTTGACCACACATCAAACTTGAAGCGCTTCATTCCCAGGATCCCACACAGGACGGTGCCCGTATGGACGCCGACACGCATGCTGACGGTCTCACATGTCTCCTGGCAGAACTGCTCTATGGCCTGGATCATGCCCAAgcccatctctacacagcagtaGGCGTGGTCTGGCCTCGGCTCAGGGCAGCCAGCTACACAGTAGTAGCAATCTCCCAGGGTGCTGATCTTCTCACAACAGGTTAGTTCACAGAGCCGGTCAAAACGTCCAAACAGATCATTGAGAAGGCCCACCAAGGCCGGTGCTGACTTATTGGCAGACATTCTAGTGAAACCCACAATGTCCGCGAAGAGAATGCTGACAGGCTCCATGCGTTTCATATTGAAAGGCCGGAAGATTATCTGTCCACGTGGGATGGAGGTCTTCTTGCGTTTGTGATTGTTATAAGGGTAATTCTTGCCGCTTGTGGCAATTTGGGCTTGTGAAGCTCCACCGCTTCCTCCACCACCCACTGAGACGGCGGAGGCAGAGCAGGCACCAGAGGAATAACGCTTGCCAGAGTTCTCACCACCGCCCTCATCGTCACCTTGCTTCATCAACTCATCTGCAACTCGCCGCGGCATGACAGAGTGGATCATACGCTCCTTCAAGGCCTTCTCCACTTCCAAGTCTTTGCCGTGCATGATAGCCTGGCCCACTTTGAGGAAGGTGCTGCGGGAACGCACCTCCGACATGATGAACAGGTGGATGCCAATGACATGGGCACACAAGTGGAGCAGAGCTTTGGCCGGGCCCAACCAGCGGAGGGTGTCTCCTTCCCAATCAGAACCTGAACCCACTAACCCTGTCCCCCATCCAGTAGTGTCATAACTCTTTTGAAGCAAGGGCAGCCATTCTAATGCTTCAAATAATATAGAATACAGGAGCCCTAGCATCACTGAGGCATACAGACGGACATGAAGGACACTGTATAATAACAACAGAACCTCCATGCACAGGGAAAAGGTGCCCACGGGGGAGATGCAAGGGGCTAGAGATGGTGCTACTTGTGGGGGATATGAGGCATTGCCACCGCCAGCCCCCTTCAGCTCAGTGTAGCCAGCAGTCTGTATCTGTGGAGCTAAGGTGATGGCGAAGGTGGCCGCGATCAGGAGCAAGGATGTTTGGTTGTACAGCCACGTGTAGGGTTGGGTTAAGGTGAATAAGAAGAGCAGCACTAGGAGGACTAAAAAGGAGGCTGTGGGGACTAGGAAGGCCATGGGGTTGCAGCGGTCACTATTGACCCCAAAGTACACCCCCCAAAGTACAGCTGCCACTGCCAGGTAAAACAGGACATAACGGAAGCGCCGCTGTGTCTGAGGAAAGCATCTCTCTTGGCACGCTTCTTCCAGGATGGGGGAGTCAAACTTGGGGTCCCAGCACTGAGCAGCAGAGCGCTCGAACAGCGGCGGCGCCTTCCTACGCACCCTGGAAGTGGTGGTCCCGGCCGGTCTGGAGTCTGAGCTGCAGCTGGAGGAAATACTGTATTTGTGGAGGTTAGGGTTCATTTTACTCACAGCCCCAAAGCCTCCGGCTCCTGCTCCACTGCTGGCAGCCCTCAGCGGCTCATGTTGATGCACGTGTGGCGCGCTGTTGGTAATCCGCACGGTCACGGCGCCATCCCCGCTGGAGTCGCAGCTCACTTCCGTGCCATGCATGAGAAGCTGCCGGTGATGTTGCAGAGTGGCCATATTGACCGTTGTGACGAGAAATATGAGGGGCGCGGGGAGGtgttaaatattaataatatcttCTGATGGCCCTCAGGCAATTAGACGCGGTGCGTGGACACCGAGTGCACATGTGGCacggagaggagggaggaggcggcggtgagagagtgacaggcaggcaggcagacagagggagagggagagggagaacgAGAGAGCAAAGGTGTTTGTTGGAATAATCACAGTGCATGAATGGTGAGCACGGCACAGACGTCTTTGCTACGCACACAGCAGCCCGCACACTCACTCGCACAAGACGCGCCGTTCCAGTTTCTTGAGCAGCTCATTATCCGAACCCGGGTTTGCGTCAGTACTCACATTACATGTATCCTTCTCCAAAGAGGCTCTGGGTCTGAGCCCGGCTTTCCCTCCAGCTGCGGTAAAAACACTGTCATCACTCTTTCTGCCTCCTGAATTGAACATCCTTCTCGGAAAGGACTGGTTAGTGATGCAACGATGCTATGCCTTCATCAGGTCGGTGCTGACGTTACATGACTGAAAATGACCTCATCTGGATGTGCGCAATATTTCGAtactgctgacattacagaatcaGACAGCGTCAGGAAAAAATACCGAGATAGTTCTTCATTCCGAAATAACGTCGATTGCGTGGTAAAACAGCGTTAGGGCCAGGGCTTCATCGTGTGAGCAGATACAGACTGTCAACAGTTGGCGTTGTGCACAGCAAGTGGCTACAAAAGTTACACTGTCCCTCTTGTCTCCACATGTGCGACAAATGGTCAATTTACATTTCCCTCTCCCCTCttaaaacaccccccccccaaaaaaaaaaaaaac

Function

NR:

description
PREDICTED: adenylate cyclase type 9-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8074 True 2851 lncRNA 0.44 2 18836277 18857539

Neighbor

gene id symbol gene type direction distance location
LOC120560204 pbx4,LOC104952752,LOC103392870,LOC102788435 coding downstream 31643 18790616 ~ 18804634 (-)
LOC120562921 LOC104952754,LOC103372004 coding downstream 48419 18783925 ~ 18787858 (-)
LOC120559658 LOC104952753 coding downstream 69393 18752659 ~ 18766884 (-)
LOC120559642 slc27a1,LOC103362239 coding downstream 84286 18743569 ~ 18751991 (-)
LOC120563090 NA coding downstream 99756 18727400 ~ 18736521 (-)
gde1 gde1,LOC100700294,LOC102797450 coding upstream 127564 18985103 ~ 18990486 (-)
xpnpep1 xpnpep1 coding upstream 247708 19105247 ~ 19120656 (-)
cusr NA coding upstream 263494 19121033 ~ 19142663 (-)
pnpla6 pnpla6,LOC107083430 coding upstream 746890 19604429 ~ 19639873 (-)
LOC120568545 atp5h,LOC101475776,LOC102207628,LOC102296504,LOC100697434 coding upstream 782992 19640531 ~ 19644093 (-)
G5894 NA non-coding downstream 147232 18630276 ~ 18689045 (-)
LOC120545674 NA non-coding downstream 171770 18663944 ~ 18664507 (-)
G5809 NA non-coding downstream 248741 18584673 ~ 18587536 (-)
G5801 NA non-coding downstream 260946 18575017 ~ 18575331 (-)
G5800 NA non-coding downstream 262023 18574050 ~ 18574254 (-)
G5926 LOC103372008 non-coding upstream 17336 18874875 ~ 18875738 (-)
G5935 NA non-coding upstream 72717 18930256 ~ 18930500 (-)
G5954 NA non-coding upstream 98868 18956407 ~ 18956631 (-)
G5970 NA non-coding upstream 103673 18961212 ~ 18961997 (-)
G5980 NA non-coding upstream 153655 19011194 ~ 19011517 (-)
LOC120556582 NA other downstream 954518 17879868 ~ 17881759 (-)
LOC120556682 NA other downstream 988240 17835904 ~ 17848037 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other downstream 1000516 17817507 ~ 17835761 (-)
LOC120560175 NA other downstream 1122379 17710639 ~ 17713898 (-)
LOC120569099 NA other downstream 1415179 17412053 ~ 17421098 (-)
G5930 LOC102307335,LOC101466373 other upstream 27429 18884968 ~ 18890220 (-)
mcrip2 mcrip2,LOC104963804 other upstream 114431 18971970 ~ 18982318 (-)
cxcl12b cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533 other upstream 165677 19023216 ~ 19037081 (-)
G6084 NA other upstream 632049 19489588 ~ 19545927 (-)
LOC120569510 NA other upstream 907354 19764893 ~ 19765387 (-)

Expression


Co-expression Network