G5954


Basic Information

Item Value
gene id G5954
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 18956407 ~ 18956631 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU8110
ggaacacaAATGATCtagcctgatgatcatagttagtctagttagttgactcctacagcaagcctggagtaatcagtagactgtctgtgaaagggttgtcatggttactaagagCCTGgcccatgtttataaacatctctttgatctgataacgatagcacctggtcttaatatgtctcctgtagcacaccgcagcacttcagacactgagagcaagctctcaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8110 True 225 lncRNA 0.44 1 18956407 18956631

Neighbor

gene id symbol gene type direction distance location
LOC120560204 pbx4,LOC104952752,LOC103392870,LOC102788435 coding downstream 151773 18790616 ~ 18804634 (-)
LOC120562921 LOC104952754,LOC103372004 coding downstream 168549 18783925 ~ 18787858 (-)
LOC120559658 LOC104952753 coding downstream 189523 18752659 ~ 18766884 (-)
LOC120559642 slc27a1,LOC103362239 coding downstream 204416 18743569 ~ 18751991 (-)
LOC120563090 NA coding downstream 219886 18727400 ~ 18736521 (-)
gde1 gde1,LOC100700294,LOC102797450 coding upstream 28472 18985103 ~ 18990486 (-)
xpnpep1 xpnpep1 coding upstream 148616 19105247 ~ 19120656 (-)
cusr NA coding upstream 164402 19121033 ~ 19142663 (-)
pnpla6 pnpla6,LOC107083430 coding upstream 647798 19604429 ~ 19639873 (-)
LOC120568545 atp5h,LOC101475776,LOC102207628,LOC102296504,LOC100697434 coding upstream 683900 19640531 ~ 19644093 (-)
G5935 NA non-coding downstream 25907 18930256 ~ 18930500 (-)
G5926 LOC103372008 non-coding downstream 80669 18874875 ~ 18875738 (-)
G5921 LOC103372008 non-coding downstream 98868 18836277 ~ 18857539 (-)
G5894 NA non-coding downstream 267362 18630276 ~ 18689045 (-)
LOC120545674 NA non-coding downstream 291900 18663944 ~ 18664507 (-)
G5970 NA non-coding upstream 4581 18961212 ~ 18961997 (-)
G5980 NA non-coding upstream 54563 19011194 ~ 19011517 (-)
G5984 NA non-coding upstream 93931 19050562 ~ 19050835 (-)
G6020 NA non-coding upstream 279562 19236193 ~ 19242318 (-)
G6025 NA non-coding upstream 304604 19261235 ~ 19263727 (-)
G5930 LOC102307335,LOC101466373 other downstream 66187 18884968 ~ 18890220 (-)
LOC120556582 NA other downstream 1074648 17879868 ~ 17881759 (-)
LOC120556682 NA other downstream 1108370 17835904 ~ 17848037 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other downstream 1120646 17817507 ~ 17835761 (-)
LOC120560175 NA other downstream 1242509 17710639 ~ 17713898 (-)
mcrip2 mcrip2,LOC104963804 other upstream 15339 18971970 ~ 18982318 (-)
cxcl12b cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533 other upstream 66585 19023216 ~ 19037081 (-)
G6084 NA other upstream 532957 19489588 ~ 19545927 (-)
LOC120569510 NA other upstream 808262 19764893 ~ 19765387 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other upstream 809866 19766497 ~ 19796522 (-)

Expression


Co-expression Network