mcrip2 (mcrip2,LOC104963804)


Basic Information

Item Value
gene id mcrip2
gene name mcrip2,LOC104963804
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 18971970 ~ 18982318 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU8138
ACTGTAGCTTTCCGTCCTAATGAAAATAGCAAAGTGTGCACACTGTGCAGTGTCCTTGTATTCTGTCAGAGAGCGGAGGTGTCGCAGTCAGCAGCCTATACCGGAGAGAGGGTAAAGTGCCCGGCCTGGAGTGCCACTGTCATCGGACGTCAGGAACCAGAAAGTCCCGTGCCTCTGACTGACTGATCCCCCGGTTTGTGGAGCCGCTTTCTCCTTGGATGACCTACACGCAACCTCTCACAGGAGCAGCGGCCGTCGCTTCGTAGCCTACATCTGAACACCTGCTGGTTAGGAGGCGCAGCGGGCTGCCTGTTAATATACAACTCCCAACCAGGCAAAAATAACGAGTCTCTTGCAAGCGTCAGGCCGACTCTGGAGCAGCTAATCTGGGGAACAAAATAAGACGCGTCGCGAATTTCTTTTCCAACATCGTGGCTGCGTCAGGAGGAGCGGACAGCGGACTAAAAAGTTGGGAGTTGACGGTCAATGTGCGCACCTGATACGTAAGAAGACAAAGACAGGTCCTTTTAAACACAGACACTACAGAATACCTTGGCGTTCACATGATGTACACAATCACCAGAGGTCCCAGCAAACTTGTTACACAACGGAGGACAGGTCCCACGCAACAAATCGAGAGCAAATTCAGCGACTTGAAGCTCAAGCCGACGTCTTGGCTCTCATCAAACTCTCCGCCCCCAAAGATTGTGTTCAATCGTCTGAACGGGAAGCGCTACCACGGTGCAGCCACACAGAAGACCGCCAGCCCAGCAGAGGGATTCACTCCTGCACATGAAGAGAACGTCCGATTTGTGTATGAAGGAGGTGGAGCAGAAGATGGGAGATGGGGAAGGTGGGGAGTCAACTGCCAGCCAGGGGCCCGTTCAGTACACTGAGAAGACTCCCAGTGCTGCGATGAAGAACTTTGTGCCCATCGACCTGGAGGAGTGGTGGGCTCAGCGCTTCCTTGCCAACATTGCCAACCTGTCCTGACCGGCTGAGGCTTTGAGGCGGGACAGGAAGCACGGCGTCGATGCTCCGCCGTGAGGGCATCACGAGGGTGGAGAGGAAGTGAGGCGAGCAAGTCTCCGGTATCTGCGGTGAAAAAGGGTCGTGCGTAATTAGGAATCTGATTTGATGCCCTGTGCTTCATGCTGCTGtagatgcaacaacagtgaccTAACTGAACTGTGACAGCGCCGACTCGAGGTTGTGCTGTTGTGAAGGACCCGTCTCTCTCGACGTGAATGACGTATCTGAGAGAAGTTGGGAGAACCCTGCATTCTTTCTCAAGTGTTCTCGGCTGTATGTACGTCTTGGCTGATCTTTGGATATAAATCTAttgaagagcaa
>XM_039791367.1
ACGGTGGGCCAAGCACTGTAGCTTTCCGTCCTAATGAAAATAGCAAAGTGTGCACACTGTGCAGTGTCCTTGTATTCTGTCAGAGAGCGGAGGTGTCGCAGTCAGCAGCCTATACCGGAGAGAGGGTAAAGTGCCCGGCCTGGAGTGCCACTGTCATCGGACGTCAGGAACCAGAAAGTCCCGTGCCTCTGACTGACTGATCCCCCGGTTTGTGGAGCCGCTTTCTCCTTGGATGACCTACACGCAACCTCTCACAGGAGCAGCGGCCGTCGCTTCGTAGCCTACATCTGAACACCTGCTGGTTAGGAGGCGCAGCGGGCTGCCTGTTAATATACAACTCCCAACCAGGCAAAAATAACGAGTCTCTTGCAAGCGTCAGGCCGACTCTGGAGCAGCTAATCTGGGGAACAAAATAAGACGCGTCGCGAATTTCTTTTCCAACATCGTGGCTGCGTCAGGAGGAGCGGACAGCGGACTAAAAAGTTGGGAGTTGACGGTCAATGTGCGCACCTGATACGTAAGAAGACAAAGACAGGTCCTTTTAAACACAGACACTACAGAATACCTTGGCGTTCACATGATGTACACAATCACCAGAGGTCCCAGCAAACTTGTTACACAACGGAGGACAGGTCCCACGCAACAAATCGAGAGCAAATTCAGCGACTTGAAGCTCAAGCCGACGTCTTGGCTCTCATCAAACTCTCCGCCCCCAAAGATTGTGTTCAATCGTCTGAACGGGAAGCGCTACCACGGTGCAGCCACACAGAAGACCGCCAGCCCAGCAGAGGGATTCACTCCTGCACATGAAGAGAACGTCCGATTTGTGTATGAAGCGTGGCAGGAGGTGGAGCAGAAGATGGGAGATGGGGAAGGTGGGGAGTCAACTGCCAGCCAGGGGCCCGTTCAGTACACTGAGAAGACTCCCAGTGCTGCGATGAAGAACTTTGTGCCCATCGACCTGGAGGAGTGGTGGGCTCAGCGCTTCCTTGCCAACATTGCCAACCTGTCCTGACCGGCTGAGGCTTTGAGGCGGGACAGGAAGCACGGCGTCGATGCTCCGCCGTGAGGGCATCACGAGGGTGGAGAGGAAGTGAGGCGAGCAAGTCTCCGGTATCTGCGGTGAAAAAGGGTCGTGCGTAATTAGGAATCTGATTTGATGCCCTGTGCTTCATGCTGCTGtagatgcaacaacagtgaccTAACTGAACTGTGACAGCGCCGACTCGAGGTTGTGCTGTTGTGAAGGACCCGTCTCTCTCGACGTGAATGACGTATCTGAGAGAAGTTGGGAGAACCCTGCATTCTTTCTCAAGTGTTCTCGGCTGTATGTACGTCTTGGCTGATCTTTGGATATAAATCTAttgaagagcaaaaaaaaaaaaaaaaaaaagtaaa

Function

symbol description
mcrip2 Predicted to be located in cytoplasmic stress granule and nucleus. Orthologous to human MCRIP2 (MAPK regulated corepressor interacting protein 2).

NR:

description
PREDICTED: protein FAM195A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8138 False 1353 TUCP 0.44 5 18971993 18982304
XM_039791367.1 True 1398 mRNA 0.53 5 18971970 18982318

Neighbor

gene id symbol gene type direction distance location
LOC120560204 pbx4,LOC104952752,LOC103392870,LOC102788435 coding downstream 167336 18790616 ~ 18804634 (-)
LOC120562921 LOC104952754,LOC103372004 coding downstream 184112 18783925 ~ 18787858 (-)
LOC120559658 LOC104952753 coding downstream 205086 18752659 ~ 18766884 (-)
LOC120559642 slc27a1,LOC103362239 coding downstream 219979 18743569 ~ 18751991 (-)
LOC120563090 NA coding downstream 235449 18727400 ~ 18736521 (-)
gde1 gde1,LOC100700294,LOC102797450 coding upstream 2785 18985103 ~ 18990486 (-)
xpnpep1 xpnpep1 coding upstream 122929 19105247 ~ 19120656 (-)
cusr NA coding upstream 138715 19121033 ~ 19142663 (-)
pnpla6 pnpla6,LOC107083430 coding upstream 622111 19604429 ~ 19639873 (-)
LOC120568545 atp5h,LOC101475776,LOC102207628,LOC102296504,LOC100697434 coding upstream 658213 19640531 ~ 19644093 (-)
G5970 NA non-coding downstream 9973 18961212 ~ 18961997 (-)
G5954 NA non-coding downstream 15339 18956407 ~ 18956631 (-)
G5935 NA non-coding downstream 41470 18930256 ~ 18930500 (-)
G5926 LOC103372008 non-coding downstream 96232 18874875 ~ 18875738 (-)
G5921 LOC103372008 non-coding downstream 114431 18836277 ~ 18857539 (-)
G5980 NA non-coding upstream 28876 19011194 ~ 19011517 (-)
G5984 NA non-coding upstream 68244 19050562 ~ 19050835 (-)
G6020 NA non-coding upstream 253875 19236193 ~ 19242318 (-)
G6025 NA non-coding upstream 278917 19261235 ~ 19263727 (-)
G6052 smc3 non-coding upstream 405009 19387327 ~ 19394267 (-)
G5930 LOC102307335,LOC101466373 other downstream 81750 18884968 ~ 18890220 (-)
LOC120556582 NA other downstream 1090211 17879868 ~ 17881759 (-)
LOC120556682 NA other downstream 1123933 17835904 ~ 17848037 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other downstream 1136209 17817507 ~ 17835761 (-)
LOC120560175 NA other downstream 1258072 17710639 ~ 17713898 (-)
cxcl12b cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533 other upstream 40898 19023216 ~ 19037081 (-)
G6084 NA other upstream 507270 19489588 ~ 19545927 (-)
LOC120569510 NA other upstream 782575 19764893 ~ 19765387 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other upstream 784179 19766497 ~ 19796522 (-)
spink4 NA other upstream 1060445 20042763 ~ 20044726 (-)

Expression


Co-expression Network