G6020


Basic Information

Item Value
gene id G6020
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 19236193 ~ 19242318 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU8193
CTCTGCGCTCCTCCTGCTCGTCCAGGCTGCCCTGGTAGTTGTAGTAGGCGATATCACCCAGGATCAATGACTCCTGGCTGATGGGCAGGATGCCACACTTCATAGATGACACAGCAGCCGTGGCTGGAGTGTGCACATGTATGATGCAGCGGATGTCTGGACGCATGGAGTAGATGGCAGCGTGGGGGCTGAAACCTTGGGGGTCGATCCTCAGGTTGGTGGAGCCCTGCTCGATCACTTCCCCGATGATGTTGACCTTCACCAGGTTTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8193 True 272 lncRNA 0.50 3 19236193 19242318

Neighbor

gene id symbol gene type direction distance location
cusr NA coding downstream 93530 19121033 ~ 19142663 (-)
xpnpep1 xpnpep1 coding downstream 115537 19105247 ~ 19120656 (-)
gde1 gde1,LOC100700294,LOC102797450 coding downstream 245707 18985103 ~ 18990486 (-)
LOC120560204 pbx4,LOC104952752,LOC103392870,LOC102788435 coding downstream 431559 18790616 ~ 18804634 (-)
LOC120562921 LOC104952754,LOC103372004 coding downstream 448335 18783925 ~ 18787858 (-)
pnpla6 pnpla6,LOC107083430 coding upstream 362111 19604429 ~ 19639873 (-)
LOC120568545 atp5h,LOC101475776,LOC102207628,LOC102296504,LOC100697434 coding upstream 398213 19640531 ~ 19644093 (-)
LOC120574931 LOC103369153,LOC102777830,LOC104922226,LOC101476272 coding upstream 403183 19645501 ~ 19647903 (-)
caly LOC103369152,LOC102207078,LOC102778125,LOC102077312,LOC102295693 coding upstream 438346 19680664 ~ 19690245 (-)
nsmce1 nsmce1,LOC102778604 coding upstream 461112 19703430 ~ 19713643 (-)
G5984 NA non-coding downstream 185358 19050562 ~ 19050835 (-)
G5980 NA non-coding downstream 224676 19011194 ~ 19011517 (-)
G5970 NA non-coding downstream 274196 18961212 ~ 18961997 (-)
G5954 NA non-coding downstream 279562 18956407 ~ 18956631 (-)
G5935 NA non-coding downstream 305693 18930256 ~ 18930500 (-)
G6025 NA non-coding upstream 18917 19261235 ~ 19263727 (-)
G6052 smc3 non-coding upstream 145009 19387327 ~ 19394267 (-)
G6081 pdcd4,LOC104958203 non-coding upstream 238817 19481135 ~ 19488019 (-)
G6086 NA non-coding upstream 251564 19493882 ~ 19496128 (-)
G6093 NA non-coding upstream 306460 19548778 ~ 19549158 (-)
cxcl12b cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533 other downstream 199112 19023216 ~ 19037081 (-)
mcrip2 mcrip2,LOC104963804 other downstream 253875 18971970 ~ 18982318 (-)
G5930 LOC102307335,LOC101466373 other downstream 345973 18884968 ~ 18890220 (-)
LOC120556582 NA other downstream 1354434 17879868 ~ 17881759 (-)
LOC120556682 NA other downstream 1388156 17835904 ~ 17848037 (-)
G6084 NA other upstream 247270 19489588 ~ 19545927 (-)
LOC120569510 NA other upstream 522575 19764893 ~ 19765387 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other upstream 524179 19766497 ~ 19796522 (-)
spink4 NA other upstream 800445 20042763 ~ 20044726 (-)
LOC120574674 NA other upstream 944963 20187281 ~ 20193338 (-)

Expression


Co-expression Network