G6084


Basic Information

Item Value
gene id G6084
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 19489588 ~ 19545927 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU8277
tttttgtcactCAAAAGCAATATAGACGGGGGTCACGGCACCACCCGATTTGGAGAAAAGTCCAACTTGCTTCTTTTTTCTTCAAGCATGTATGATTGGCATTTCTCATATGTATACATTACTAGCTTAATGTTTAACAACTACTGCTGCTATTTGTTAAAAATATCTCCAATCACCCTATTTTACAACTGATATCACTTGCTTTAACAGATTAATGTAACAGCAAAAGGaacactaaaaaaagaaaaaaaagaaaaaaggaaaaactaaaGTCAAAACagcattaataaaaaagaattatTGAAATAATTTATATCTTTGTATTCTCATGGAAAATTTTGTTTAGAAATGAACCACTGGATCAGTCTAAACATAGGcacagtttttaaaaataaacaaatgattgaaaaaaaaaattataaacacGCAATCATCAGACCTTTGTTCTCTATGGTCAAAAAGCAGTTAGCATAAGTTATCTTGAGCGAAGGtgatgtttaataaaaaaaaaagtgaatatcaaaagaaaatataacaaGATGACAAAGTTAAAATTTCGGCAGCAGCAGTAAATGTGAAGTTCcaaagactttttttgtttgtttttgcatacAATTGTATCCTTGCTCACATAATAGATGCTTGTAATTACTGTAAATACATTGGCAATGGGAGCACGGTTTATATGGTTAAAAGACTTGCCACTTAGCTCACAGTTACTCAATATATATAACTTCATATATCTTCAGTTTTGGCAAAGAGATGGAAATATTTTCCTCTTGTATGATTCGGAATGAAACATGAGTGGGGGTGGCTGGGGTCCTAAAATGACCGTGATGAACTCTGGAGTAACACAGAAGTCAAGTCTCAGACGATTCACCTCGTTTCTGCCCAAGGATGGCGAAAGaaacattttcttcttcttcttcttcctcctcctcctcctcctcctcctcctcctggtaTTTGCCCCCGACACTGATTGTGGCCAGTCTGTTCTCTTTACAGTGTATGATACACATAATGGGGGCGGGCAGGCGAGAGGGTGCAGAGCAAGTGGAGGGTTTGGAGGTAAGAAGGACTGGGATTGAGCTGCTCTTGGCTCAGACCATGGCACGGTATGGTCCCTGCATCTTGAGGAACTGGATGATGAAGGAGGGGCCTCCCGCGACAATCTGGGGCGGCAGGTGGCTGAGGGGACAGTTCTCGATGCTCATGATGGACAGCTTGCTGCACAGGGCCAGCTCGAACGGGAGGCTGTGCAGGTTGGGGTTGTCATTGAGGTACAGTTCCTCCAAGTTCTCCA
>TU8278
TTTATAACAGTTAAAAAGATGTATGTACATACAGAACATCACCAAACATGGTCATTTTCACTCAATTGCAAAGTAGCACTCTGCAACTAGTTGGTTTCAGGACAACTGTCTTACAATAGGGCGGCATTGATTAAGTTTGTCATTTACAACCAAGCACAcacatttttcctctttttcatttGCCAAATAATACTTAATAAAACAACAGGATGCTTACTAAAACAAATTGTAGTTGAATCGCTAGTCCAAATCCAAGTTCCTGCTGCCACCACGCAGCTTTGTATGTACACAGGTAGAAACACCTCAGACTGGATCTTGGTCACTGTGGTTAGCAATAAAGACTCACATAGAGGTAGTCATGTCTGCATCTGCTCGCCCAGTCGAGAGTCGAGACAACTGACCCAAAAACTTTGCTTTCAACATCTGTTCAATCTGTGGACCCAGATCCCTTCGCTGacattaaagaaataaaagaagaaaagtgattatctgtctttgttgattAAATCAAACGGTCATAAAGGTTTTGCTTGGTGCACATAAGGCAGACAATGGACATACTATGGGGAGGGGGTGTtttttgtgggtgtgtgcaGGTGGGATTCAGGTAAGAGAAAGAGCTGGTGGCTTCACATTAAAAGGGCCTTTCCACCAAAAGTGACTTGGTTTAATTAGAAAAGCAGACTTTTATATAGATATGTGCTCCCAAGATGGAGAAAGTGTTCCTACAACATCGAGCTGAACTATCTAAAGTCATGTTTGTCCTTTCTGAAAACAGCTGCAACTTGAGATAGatgtggtaaaaaaataaaataaagtatgtATTTGAAGTCACATCATTTTATTTCCCCTGATCTTGCAATCGTATTACTCAAACATGATATGACTAgtgagaaaaacatgaaaaagaaaaaaaaaaaaaaaccatctcatttctgtggggaaaaaaagctctgCCTTTGCAGAATAAAAATGCAAGTCAGTTTTGGTGGAATTCCCCTTTAATGCCAAAGACAAGTGAGACGCAAGCTAATGCACATCCACTTGGTAGCATAATGGCATTATCTTCCATTGCACTTTGTCTTTTTGTAAAACTCATCACATTACAGACTTTGTAATACTGAGTCTACCGTAACGTCAGATTACTGTACAGAGTAAAAGGAAAAATAAGACAGAAAGAAACTAGACCCAAATTTACATTGTAACGACCAGTTGCTTGTCATCAAGTACAGTCAGTGGCCATAGACACAAGGAATAgccaaacaaacacataaaaaagaCCATTAAGGCTGTTTGTCAATGTAGATTAAGTAGGATAAGCATTGCCACACAACGCTTTGATACCCTTTGCAATATACAAAAAGGGAGCATTTGCAGATACACCAAATAGCCACTAAATCCAAGTCGTCTATGCAAAAACGCCTGATTCTGACCCAGACAAATCATGTCAAATATGTGTTCAACATGCTTGTTTCCTGTACAAAATAACCAGGCAAGAAAAAGACAAGTTGTAGAATAAAAAGCAAAAAGAGCGAAATGACTTTGATTCTGCGATGCTCTCAACGGCCTAAAATCGCAGCcaatagaaaaataaacacCAATTGTACTCCCATTATTTTTGGATGCACCAGTATGAAATAAGTCGTCATCATTTTTGATCCAACAAGTCACACCTCTCTGCGTTCCTCTCTAAATGCTCTCCGGTAAATTAGCCCAGTTCAGTTTCTGTCACACCTCCCATCATCCTCTGCGTCTTCATACACTGGCATCCTCAACCTTGCAAAATGGCacatgaaaaaagtaaaaacattgaGACTGAATGTAAAAATGGGTCACAGCACTCTCGCTGCATACCTAATGCACATCTCACTTTTGAGTACTTGTTGAAGGCATTTTTCACACAATTGTTTACAGCTAAaagtaaatacacacacaaaaaaaaaagaaaaacttccaAAGCTTTTATAGAAAACCCAGGAATGCAATGCCTCCGGTGTGTTGTTGAGCATGAACACAGAAAgccctttttacatttttttgtgttgtctttttccgACAGTCTTGTACTGTAACTGCGTTAAGCTCAAATATGCACCTTGTTGTGTTGTCTCATCGTTGTGTCCAAAACGATTTGATCTGTGAGAAACCCACGGGGCCTGACGCCAGATCGAAAAGGTCAGTGGATCTGTCCCTCGTCAGGATTTCGAGTGAAGTCTGTATCAGTGTTGGGAGTGGGTCGTTCCCCTTGTACAGCATATGTTTCAGTCCAAAAGCAGCAACAGGTTCTGCTGGTAAATTAGAAGCAGCGGTACATCGTTCCCCACGACCCGGCCCCACCCCCGAGGTGAGCTGTGGCGCTCTGATCACACAGGCCTCCCGTGGTGGAGCGCATACCACAGcccacaaaaacacaccaagctgctgctgcaaaaaaaTAGACCCATAGTTTCAATAGATAACAGATTCATGATTGATTATAGAGCGGGGATGCAACACAtttccaaaaagaaaaaaaaggggggttgTTTGATTACCTTTTTGTTGGGGATTTTAATGTACAGTCACTTGAAATAATACTAACTGAATGCACATTTCatcatttagaaaaaaagaaaacacttcaTGTAAAAGGGATTTAAAATAAACGCCATTCTGAACTGCAATAAGCCGTTTTGCTTGCAATGGCGAAAGGACATAGGaaccttaaaaaaaatctcaaagcCCCACAGACCCTTCTACAGTTCAAGAGAGCAAGTTCCTTTTAAGATTGACAGGATAAAACTTCCTCAAAGAAAGTTAACTAGTATATTCTGAGCCCGCTTAgctcaacatttatatttaattgaTACAAATTTACATAATAAACCATTCTTTTAACAGATAAAATACTTTATGAAACAAAATGCCCCCATTCGAAATAACCAATGAGAGGCTactgtgtgttttatttctgtaataTAGAGGATGCCAATgtcttctattttattttaaaagtgcaTAAGAGCAGCAGCATTGCTGGGACAGTGTGGGACAAAAGAagatatataaaagaaaaaatgaaattataaaTCAAGGGAACATTTTCCCCACCATGTAATTAAGATTCTTAGGAGACCCTGTCAAAAATCAAGAAACTATAGAAATAATGAGGATATTAACGAAAAAGGAAGTGTTACCTGTCAATTTTTAATTATCAAACCTTTTTCTTTAAGCTCTAACACACTCTCCACTTGCTCCAGAGACCCAGATAATGTCTTTTTGTTAAATGCGTGATATGTTGGTCAATTGAATGACAGCTATGCAGCCCAACACTGAAGATAATATCAAACCAGTAAACATAACTAAAATTGCACTCAAGGCAACAACCAGGATTTGAATTAATTAATAAaaaaaaaaaaaaaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8277 False 1306 TUCP 0.40 2 19509261 19545927
TU8278 True 3405 lncRNA 0.47 2 19489588 19513951

Neighbor

gene id symbol gene type direction distance location
cusr NA coding downstream 346925 19121033 ~ 19142663 (-)
xpnpep1 xpnpep1 coding downstream 368932 19105247 ~ 19120656 (-)
gde1 gde1,LOC100700294,LOC102797450 coding downstream 499102 18985103 ~ 18990486 (-)
LOC120560204 pbx4,LOC104952752,LOC103392870,LOC102788435 coding downstream 684954 18790616 ~ 18804634 (-)
LOC120562921 LOC104952754,LOC103372004 coding downstream 701730 18783925 ~ 18787858 (-)
pnpla6 pnpla6,LOC107083430 coding upstream 58502 19604429 ~ 19639873 (-)
LOC120568545 atp5h,LOC101475776,LOC102207628,LOC102296504,LOC100697434 coding upstream 94604 19640531 ~ 19644093 (-)
LOC120574931 LOC103369153,LOC102777830,LOC104922226,LOC101476272 coding upstream 99574 19645501 ~ 19647903 (-)
caly LOC103369152,LOC102207078,LOC102778125,LOC102077312,LOC102295693 coding upstream 134737 19680664 ~ 19690245 (-)
nsmce1 nsmce1,LOC102778604 coding upstream 157503 19703430 ~ 19713643 (-)
G6081 pdcd4,LOC104958203 non-coding downstream 1569 19481135 ~ 19488019 (-)
G6052 smc3 non-coding downstream 95321 19387327 ~ 19394267 (-)
G6025 NA non-coding downstream 225861 19261235 ~ 19263727 (-)
G6020 NA non-coding downstream 247270 19236193 ~ 19242318 (-)
G5984 NA non-coding downstream 438753 19050562 ~ 19050835 (-)
G6093 NA non-coding upstream 2851 19548778 ~ 19549158 (-)
G6131 NA non-coding upstream 205674 19751601 ~ 19751818 (-)
G6233 NA non-coding upstream 293227 19839154 ~ 19841715 (-)
G6242 NA non-coding upstream 371189 19917116 ~ 19920280 (-)
G6264 NA non-coding upstream 636112 20182039 ~ 20182294 (-)
cxcl12b cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533 other downstream 452507 19023216 ~ 19037081 (-)
mcrip2 mcrip2,LOC104963804 other downstream 507270 18971970 ~ 18982318 (-)
G5930 LOC102307335,LOC101466373 other downstream 599368 18884968 ~ 18890220 (-)
LOC120556582 NA other downstream 1607829 17879868 ~ 17881759 (-)
LOC120556682 NA other downstream 1641551 17835904 ~ 17848037 (-)
LOC120569510 NA other upstream 218966 19764893 ~ 19765387 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other upstream 220570 19766497 ~ 19796522 (-)
spink4 NA other upstream 496836 20042763 ~ 20044726 (-)
LOC120574674 NA other upstream 641354 20187281 ~ 20193338 (-)
LOC120566957 NA other upstream 2017164 21563091 ~ 21569059 (-)

Expression


Co-expression Network