LOC120574674


Basic Information

Item Value
gene id LOC120574674
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 20187281 ~ 20193338 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU8522
gGAAGTGTACCATATGTGATCATAGGTGTCACTGTCATAATAACCATACTGATGGTCTTACTGAAGCTCATGAGGAAGATGAGTATGAAACAACTGAAATTTGTGTCAAGTGCTGATACACCAAAGGAAGACGTACCAGAGAGTGCAGGTCCTGATGGAGTCTACCAATCACTCCACCCGTTGACGATGGACATAGACCAAGTCTACAGCATTCTTACACCCACAAGGCACTCCACACGGCTATGTCATAACATTCAATGATCA
>XM_039825061.1
TGTACACTTGTTTGTTGTTCTTTGATCGTCATTTTCACAATGATAGACATCTTTGCGTACTCTTGTCTTCTTTCTGCTCTGAGTATTGTGGAGATGAAGCCTCTCATCATTGGTGGCCGTGTTGGGGAAAATGTGACATTCAGATGCTCAGAGTGGAATACTTGGATGAATGTAGAATCTAATGATAAATACTTTTGTAATAGTCCATGCACAGAAGACAAACACATTATCATCAAAGCAGCATTTGGAGAGACTAAACATAACAACAGAATAAAGTTGACTAACAGAGCAAAAGGTTTAGTTGTAACCTTCAGTAATCTCCAAAAGTCAGACTCTAAGACATATTATTGTGGAGTGGTGAGATTTGCCCGTGATTCATTTATAATGGTGAATCTTAAAGTTACAGATGCTGAGTCTTCAAGTCCCAAGACAACCCCTGAAACAGTCATTGATGGTTCTACTCCCTCATTTGCTGTATCAAACAGCTCCCATGAGTCTTTAAGCAGCTCAGAAATGATAACTGATATGGCTAGATCATACATGACAACAACACCTACTGCATCAGCAACACAAGGAGCCGGAAGTGTACCATATGTGATCATAGGTGTCACTGTCATAATAACCATACTGATGGTCTTACTGAAGCTCATGAGGAAGATGAGTATGAAACAACTGAAATTTGTGTCAAGTGCTGATACACCAAAGGAAGACGTACCAGAGAGTGCAGGTCCTGATGGAGTCTACCAATCACTCCACCCGTTGACGATGGACATAGACCAAGTCTACAGCATTCTTACACCCACAAGGCACTCCACACGGCTATGTCATAACATTCAATGATCAATGCAGCAGGAGCTATTGCGTTACTCTTACATAGCAGAACGTTAAAtgattgaaaaaacaaaaacaaacatatgtTCCACTCTGACCTGCAGCTACTAACCTTAATGCCATTTGGTTCCCTTTACAAAATGATGTGGCCACTttgtaaatacagtatgttgaacaaatgTGTTATCTATcaattactgtaaatgcatatttattatgtaatttGACATCTAGTCTGATAGCATACAGCAAATGTTATGTTCCCACTGAGTGCAGGTCCTGATGGAGTGTAACAAACAGACTACACATCCACAAAGCTATGTCACAAATTGACTGGTCTAAACTGTCCCACATTTATGGATTAAAATGGATCTGATGAATGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8522 False 264 lncRNA 0.34 3 20187654 20191727
XM_039825061.1 True 1216 mRNA 0.39 6 20187281 20193338

Neighbor

gene id symbol gene type direction distance location
LOC120564208 NA coding downstream 886 20182899 ~ 20186395 (-)
LOC120556938 LOC104960150 coding downstream 60676 20114806 ~ 20126605 (-)
LOC120565191 LOC103366463,LOC102211221,LOC102302105,LOC101484083 coding downstream 98642 20044965 ~ 20088639 (-)
stra6l LOC104958947 coding downstream 145197 20033839 ~ 20042084 (-)
tdrd7a NA coding downstream 154443 20011154 ~ 20032838 (-)
LOC120556991 NA coding upstream 4683 20198021 ~ 20199878 (-)
LOC120565775 sgcz coding upstream 20379 20213717 ~ 20621798 (-)
tppp2 LOC103374906,LOC101485391,LOC102784423 coding upstream 629159 20822497 ~ 20827923 (-)
LOC120571719 NA coding upstream 648743 20842081 ~ 20845093 (-)
LOC120557145 NA coding upstream 653386 20846724 ~ 20847666 (-)
G6264 NA non-coding downstream 4987 20182039 ~ 20182294 (-)
G6242 NA non-coding downstream 267001 19917116 ~ 19920280 (-)
G6233 NA non-coding downstream 345566 19839154 ~ 19841715 (-)
G6131 NA non-coding downstream 435463 19751601 ~ 19751818 (-)
G6093 NA non-coding downstream 638123 19548778 ~ 19549158 (-)
G6269 NA non-coding upstream 2940 20196278 ~ 20203695 (-)
G6297 NA non-coding upstream 551810 20745148 ~ 20745353 (-)
G6387 psmd12 non-coding upstream 786847 20980185 ~ 20983277 (-)
G6410 NA non-coding upstream 940172 21133510 ~ 21135891 (-)
G6471 NA non-coding upstream 1126680 21320018 ~ 21320682 (-)
spink4 NA other downstream 142555 20042763 ~ 20044726 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other downstream 390759 19766497 ~ 19796522 (-)
LOC120569510 NA other downstream 421894 19764893 ~ 19765387 (-)
G6084 NA other downstream 641354 19489588 ~ 19545927 (-)
cxcl12b cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533 other downstream 1150200 19023216 ~ 19037081 (-)
LOC120566957 NA other upstream 1369753 21563091 ~ 21569059 (-)
G6592 ube2o,LOC106534564 other upstream 1515202 21708540 ~ 21709812 (-)
LOC120556502 LOC104944681,LOC103364456 other upstream 2135181 22328519 ~ 22335583 (-)
LOC120565362 pik3r6 other upstream 2472037 22665375 ~ 22692333 (-)
G6881 usp43,LOC104947996 other upstream 2788587 22981925 ~ 22988500 (-)

Expression


Co-expression Network