G6471


Basic Information

Item Value
gene id G6471
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 21320018 ~ 21320682 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU8793
GGCAGGATACAGTAGAACAGCCTTGTGTAATCCCACTGGACAGATCTGTTCTGTTGGAGTGTCTTCTGCTCTGGTGCCACCTACACCGAGGCCATCTGAACGGTCCACTTCAATGGAGGCAGGGCTGAAACCATTCTGCAAGCCATGCGGGCCACGCTCTCTCGCCATTAGGGATTCCATGAAGGAGAAACCGTCAGGCTCCACGCTCACTTTTTCGGCATCAACATCTGACATACTGCAAGACAAAGTGGTAGTATCAAAAGGACCCCGTGGCAGAGACATCCATCGTTTTTACCTGATAAAGGCCTTAAGGCAGGCACAGGTGACAGCTTCTGGGATGTCAGGGAAGAACTGCAAGCAGAGCTGACACAGAAAGTAGTCCTTCCTCTCCAGGGCCAGGAGCACAAGGTCAGGACACACACTGTTCAAGACCGTGATGGCAAATGGTCAAATTCATCAGAAATAACACTGGTCGAATTACTTTACCAGTATTTATGAACGAAGTTTGAGTTATTTAATTCAGATTTTCTGCTTCATTATGTAAACC

Function

GO:

id name namespace
GO:0016567 protein ubiquitination biological_process
GO:0032446 protein modification by small protein conjugation biological_process
GO:0070647 protein modification by small protein conjugation or removal biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8793 True 547 lncRNA 0.39 2 21320018 21320682

Neighbor

gene id symbol gene type direction distance location
prkcaa NA coding downstream 25097 21138686 ~ 21294921 (-)
LOC120568141 cacng5,LOC104927116,LOC103369746 coding downstream 190314 21110843 ~ 21129704 (-)
LOC120565189 cacng4 coding downstream 223297 21082105 ~ 21096721 (-)
LOC120565978 NA coding downstream 241342 21077872 ~ 21078676 (-)
LOC120552602 cacng1,LOC106534954 coding downstream 246079 21059448 ~ 21073939 (-)
trnas-aga NA coding upstream 2216 21322898 ~ 21322979 (-)
LOC120564440 LOC103368239,LOC104952986 coding upstream 56428 21377110 ~ 21382941 (-)
trnar-ccg_1 NA coding upstream 64089 21384771 ~ 21384843 (-)
LOC120556990 NA coding upstream 163237 21483919 ~ 21486057 (-)
LOC120556977 cep95 coding upstream 188775 21509457 ~ 21540371 (-)
G6410 NA non-coding downstream 184127 21133510 ~ 21135891 (-)
G6387 psmd12 non-coding downstream 336741 20980185 ~ 20983277 (-)
G6297 NA non-coding downstream 574665 20745148 ~ 20745353 (-)
G6269 NA non-coding downstream 1116323 20196278 ~ 20203695 (-)
G6264 NA non-coding downstream 1137724 20182039 ~ 20182294 (-)
G6483 bptf non-coding upstream 37916 21358598 ~ 21362121 (-)
G6501 NA non-coding upstream 138222 21458904 ~ 21462650 (-)
G6565 NA non-coding upstream 329926 21650608 ~ 21657734 (-)
G6571 NA non-coding upstream 343813 21664495 ~ 21667705 (-)
G6595 NA non-coding upstream 405707 21726389 ~ 21727737 (-)
LOC120574674 NA other downstream 1126680 20187281 ~ 20193338 (-)
spink4 NA other downstream 1275292 20042763 ~ 20044726 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other downstream 1523496 19766497 ~ 19796522 (-)
LOC120569510 NA other downstream 1554631 19764893 ~ 19765387 (-)
G6084 NA other downstream 1774091 19489588 ~ 19545927 (-)
LOC120566957 NA other upstream 242409 21563091 ~ 21569059 (-)
G6592 ube2o,LOC106534564 other upstream 387858 21708540 ~ 21709812 (-)
LOC120556502 LOC104944681,LOC103364456 other upstream 1007837 22328519 ~ 22335583 (-)
LOC120565362 pik3r6 other upstream 1344693 22665375 ~ 22692333 (-)
G6881 usp43,LOC104947996 other upstream 1661243 22981925 ~ 22988500 (-)

Expression


Co-expression Network