LOC120566957


Basic Information

Item Value
gene id LOC120566957
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 21563091 ~ 21569059 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU8873
CAACAGGTGTGCatgttacatttttgtttataaaTATCAGATTGAGATTAGTTAATGTGTAGGAAATGGTGTAATCATGGTTTTCCTGTTTATGTGCTGTTTATAcatcagaggcctgtactacgaatcaaggTCAACATGTCCTGgctttctttcagttacccggcctcactaaccctaacaaccgcggtcctgtttaacctgtgtcacgacggtggttatcaactagttcaatctacccagggtttcccaaacCAGCgtcgcgttcacataaaagagtgtgtgtttgcacagcacgacaaatcgcaaacatctaccagagccacatattttatataagaagagcaaactataattctacataaatatgaagaacacagacacggttttgcaGGCGAAACGCAATagagtcgctgcttcctaaaacaggaggaaaagctagtaaaaaaatagccgacgctgtagatgcgtacatcacaactcttatcaatattacttccccatcagtcaggcacaagatctgaccataattacacttgtgctttccataaactgtcgttgctttagcctattatttcagttgcaaccctggcagtggaagcgatcgtgagagcaaataaaatatatgaaaacataattcaaaccgctgtccGCAtcggcaacacacggctcaagaagccgacagcCTATGTAATTCCCTTTCATTAAAATgcatatatttcataaaaatacacatcagggaatgttaacggggttgtcggtctctacattttttaacttttatgagcgcaaccctctctctctctctccctctctgtctctccctccgcgcaccgagctccaccttatatagaacggtgacgccgttatcaatcgagtattgattagtcagtaggcggtgcttttacaccagtTGATCTcaaatctccaacttaacctgcttccgaccaggttaggtggtcagcataagttaccacggcgatttaacccggtaacaagcGATCCACCGTCGTGGTAGgctacagaaaaccctgggttgaacctgaagttacctcgttaacgccaaatcttgcttcgtagtacaggcctcaggtccCAGCTGTAGAAGTAGGCCTGAGTATATGTCAGCTTAGATGAAATTACCCTATGCACAACTGTTAAACTGTTTTTGTTGCTCCTGTACCCAAAATAAATTTGTCGAGA
>XM_039813694.1
CGAAGAAGAATAAGTAACAAGCTGGTGGACGATGGGTTAGGTGCGAAGTATTTCACTCATGATAATTAGGCAACAATGTCTTCAGTTGAGTGTTTGAGAGAATTTGTCAGCGAGCgactaactgctgctgctgaagaaatattcggtgttttaaaaaaaacaatcgtCAAGTACGAGGAAGAGATCGACCGTCAGCGCAGACTGCTGGATATCGTTTGGAACCCGGAAATAAAGTTACACAGGATAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctTGCTGACCAGCAGCAGCTCTGTATTCAGGATATGGACTCCAGTCTGGACCAGGAAGACCCCGAGTCTGCACAggttaaagaggaacaggaactCTGCACCAGTGAGGAGGGAGAGCAGTTTGTACTGAAGCAGGAGACCGCTAGCTTTATGTTGATGCCTACTTATGAGGAAAGTGACCACAGTGAACCAGATCCCAAAAGTGACCATCAGCTTCTTTCTCTCAACTCTCATGTAGCTGAGAGCCAAGATCAGGAAATAGACAAGCCTGGAGACTCAGGATCCACTAGAAATGCAGAGTCAAAACAACAAATTCAAAATCACGAAAGTATAAGTCACAGTAACATTGTAAACATCCCTAACTTGTCAAAGATTCACGGTAAAACTCGCACAGGTAAACAGTCAAAATGTGACACATGTGGGAAAGTTTACAAGTATAAGTCAGAACTGGAGAGACATCGGAGAGTCCATACAGGTGAGAAGCCATGTTCTTGCAGCACATGTGGAAAAGCTTTCCGATGTCAAAGTCACTTAACAGTCCatatgagaatccacacaggagaaaaaccgtTTGCATGCACAACATGTGAGAGAACTTTCAGACTTAGTGGTCACTTGAAAGCCCATGTGAGaacccacacaggtgagaagccatATTCTTGCAACGTTTGTGGGAAAAGATTCATTCAGATGTCAGCATTGATTACTCATAAAAGAATCCACACAGATGAGAAGCCATTCACTTGCGAAACGTGTGGGAAAAGTTTCAGACACAGTAGTGACTTGACAGtccacatgagaatccacacaggcgAGAAGCCATATACTTGTAAAACATGTGGAAGGAATTTTAGACACAGTAGTGAAATGACATCCCACATGAGAAGAGCACACACAGATGAGAAGCCATATTCCTGCAACACATGTGGGAAAAGATTCAATCAGAATTCAGTACTGAAAGCTCACACAagaatccacacaggtgagaagccatTTACCTGTGAAAACATGTAGAAAAGATTTTGGATTAAATAGTGACTTGACATGCCACATTAGAAGAGCACACACTGGTGAAAAGCCGTACCTTTGCAAGATCTGCGGGGAAAGATGCTTTGATGCGTCTCATTTGGCAAAACATATAAGCTTGCATCCCGAACTTGAAAAAACACCAGAGGATCAATTTACACAAGAGAAAACATCGACCTGAAACTCCTGTGGAGAGTTGTTCACTAACTCATTGTTATTCACTTTCAATAGCTGCATCTCTGTCACTGACTGTATACAATTCCCCATTGAGCAGAGGTCACAATATGCTGAATTACATATTCAACAACGCCGTCACGTTTTGTTGAATtaacctctttttttctcttcatataACTGCAGGACTCCTGTTTCTGTTGGCAATAGTATTTCTCAGAAACAATCATAATCTCCCAAATTTTTTGAAAATCTTTATAGCACATTGATTGCATAATTCATGATTTAATTAATATTCTTTTctacttttattgtttttaaaaccATTTGTATACATCACTTCAGTTGAATGGATTGTGAGCTCTGATGTTGAGGCGAAGAAAGCCTCTACTACTGGTGTTGGGTCACTTgctagtcttttcttttttgtctgcaacatgttttatatttttaaatatattttgtaatGGCATCATTTTAACATAATGTTTGTTATTTTGGGTTTTAGTGGTGACACactggttatatatatatttaaaaattaaataaaagcaggcATTAGCTGTAGTGTAAGGCtataaagacaaagaaaataaattgagTAATGATAGACTGTGTTATGTGAAACTGTGTCTATCTGTAACACATTGATGACACTTTCACAATTACGCATCACCAAATAAATTATGTGAGATATCTTAACAGTCACACAGAAAAGGAAACTGGTACTGAACAATGTGGTACCAACACTGCACTGAGAAAGCATGGGTCAGACTAAATCTGACTAAAGACATTCAGGTCATTTCATTCAGGAATTCATTTAATTTCAATTAGTTTCAGAAATCAGATTTCAAAATAGGAAAACTACAGATGAATTAAATGCCTCCaatgcaaaaacaacaaaaaagtgatCTAAATTAACTATAGTATATAAATGCAGCTCAGattgacattttacagatagaCTCCAAAAATCAAAGTCAGTGAAACTGTAATTAACCATGTTTTCTTTATTATATAACATATTTCaccttatttttaatttttaattttaatatttgtaaATGTTATAAAGTATGCAACAGGTGTGCatgttacatttttgtttataaaTATCAGATTGAGATTAGTTAATGTGTAGGAAATGGTGTAATCATGGTTTTCCTGTTTATGTGCTGTTTATAcatcagaggcctgtactacgaatcaaggTCAACATGTCCTGgctttctttcagttaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8873 False 1203 lncRNA 0.33 2 21563091 21566071
XM_039813694.1 True 2728 mRNA 0.38 2 21565908 21569059

Neighbor

gene id symbol gene type direction distance location
LOC120566963 NA coding downstream 1448 21557960 ~ 21561643 (-)
LOC120566968 LOC106610423,LOC105006713,LOC108260735,LOC106610424 coding downstream 6926 21554425 ~ 21556165 (-)
LOC120566976 NA coding downstream 18372 21542336 ~ 21544719 (-)
LOC120556977 cep95 coding downstream 22720 21509457 ~ 21540371 (-)
LOC120557018 cep95 coding downstream 47276 21512132 ~ 21515815 (-)
ten1 ten1 coding upstream 76738 21645797 ~ 21648906 (-)
aanat1 aanat,LOC102776855 coding upstream 134322 21703381 ~ 21706851 (-)
LOC120567942 sphk1 coding upstream 186233 21755292 ~ 21792116 (-)
LOC120557332 NA coding upstream 243649 21812708 ~ 21818443 (-)
cygb2 cygb,LOC104922950,LOC103373403 coding upstream 287611 21856670 ~ 21877258 (-)
G6501 NA non-coding downstream 100441 21458904 ~ 21462650 (-)
G6483 bptf non-coding downstream 200970 21358598 ~ 21362121 (-)
G6471 NA non-coding downstream 242409 21320018 ~ 21320682 (-)
G6410 NA non-coding downstream 427200 21133510 ~ 21135891 (-)
G6387 psmd12 non-coding downstream 579814 20980185 ~ 20983277 (-)
G6565 NA non-coding upstream 81549 21650608 ~ 21657734 (-)
G6571 NA non-coding upstream 95436 21664495 ~ 21667705 (-)
G6595 NA non-coding upstream 157330 21726389 ~ 21727737 (-)
G6602 NA non-coding upstream 173797 21742856 ~ 21743110 (-)
G6616 NA non-coding upstream 182785 21751844 ~ 21753144 (-)
LOC120574674 NA other downstream 1369753 20187281 ~ 20193338 (-)
spink4 NA other downstream 1518365 20042763 ~ 20044726 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other downstream 1766569 19766497 ~ 19796522 (-)
LOC120569510 NA other downstream 1797704 19764893 ~ 19765387 (-)
G6084 NA other downstream 2017164 19489588 ~ 19545927 (-)
G6592 ube2o,LOC106534564 other upstream 139481 21708540 ~ 21709812 (-)
LOC120556502 LOC104944681,LOC103364456 other upstream 759460 22328519 ~ 22335583 (-)
LOC120565362 pik3r6 other upstream 1096316 22665375 ~ 22692333 (-)
G6881 usp43,LOC104947996 other upstream 1412866 22981925 ~ 22988500 (-)
G6924 NA other upstream 1519441 23088500 ~ 23164937 (-)

Expression


Co-expression Network