G6592 (ube2o,LOC106534564)


Basic Information

Item Value
gene id G6592
gene name ube2o,LOC106534564
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 21708540 ~ 21709812 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU8945
CTTTCTTCTCCTTATGTGTGTTAGCTGTCGGTCACTAAAGATGACGGGGTACCACTGGACGCGTACAAATCCCCTACAGAGAGGCCGACTCGGGGTCTCCACGCCGCTCTCAGTGTCCGAACCACACGGgactcgtcctcctcctcctcctcctcctccacctcctcctccacctccacctccgcCGCCATCGTCGAGGTCCGAGTCTGAGTTAAAATCCTCTTCGCCGTGGATCATCCGTACGAGGCCAAACCGGACTGAGCCGCGATACCGCCCGGAGACCAGGTCGTGGGAGAAGAGCAGCCGCTGGGAGCCGTCCGCCGTGGGAGACAGAGCCATGGATAGAGGCTCCGAGCCAGGGCTGGCTGCGGGAGAGAGGCCTGGGGTCAGGGATGCTGCCGCTTCTGCTGCGTTCGTTGTGGCCGCTGCATCCGACGCTAGTGGCTCCGCCATCGCTGCTGTTGTCCAGGGAGTGATGCTAGAGCGCGAGGATGATGGTggaatgaaaaaaaatttaacctgGAAGCAGCGATGTGCACGTGTTTACGTCGCTACGAAGAGCTGCGTAGCTGTAGCGCAGTGTGTGCGCGTCATCACGCAGTACCCTCTCGCACCACTGAGAGGCAGTGTGAGTCACGAAATAATTGATGGTGCCGGACA

Function

symbol description
ube2o Orthologous to human UBE2O (ubiquitin conjugating enzyme E2 O).

NR:

description
PREDICTED: E2/E3 hybrid ubiquitin-protein ligase UBE2O-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8945 True 660 TUCP 0.60 2 21708540 21709812

Neighbor

gene id symbol gene type direction distance location
aanat1 aanat,LOC102776855 coding downstream 1689 21703381 ~ 21706851 (-)
ten1 ten1 coding downstream 59634 21645797 ~ 21648906 (-)
LOC120566963 NA coding downstream 146897 21557960 ~ 21561643 (-)
LOC120566968 LOC106610423,LOC105006713,LOC108260735,LOC106610424 coding downstream 152375 21554425 ~ 21556165 (-)
LOC120566976 NA coding downstream 163821 21542336 ~ 21544719 (-)
LOC120567942 sphk1 coding upstream 45480 21755292 ~ 21792116 (-)
LOC120557332 NA coding upstream 102896 21812708 ~ 21818443 (-)
cygb2 cygb,LOC104922950,LOC103373403 coding upstream 146858 21856670 ~ 21877258 (-)
LOC120558174 ubn2,LOC103364441 coding upstream 290456 22000268 ~ 22020435 (-)
ttc26 ttc26,LOC102798810 coding upstream 312432 22022244 ~ 22033208 (-)
G6571 NA non-coding downstream 40835 21664495 ~ 21667705 (-)
G6565 NA non-coding downstream 50806 21650608 ~ 21657734 (-)
G6501 NA non-coding downstream 245890 21458904 ~ 21462650 (-)
G6483 bptf non-coding downstream 346419 21358598 ~ 21362121 (-)
G6471 NA non-coding downstream 387858 21320018 ~ 21320682 (-)
G6595 NA non-coding upstream 16577 21726389 ~ 21727737 (-)
G6602 NA non-coding upstream 33044 21742856 ~ 21743110 (-)
G6616 NA non-coding upstream 42032 21751844 ~ 21753144 (-)
G6615 NA non-coding upstream 43909 21753721 ~ 21754158 (-)
G6617 NA non-coding upstream 52285 21762097 ~ 21762306 (-)
LOC120566957 NA other downstream 139481 21563091 ~ 21569059 (-)
LOC120574674 NA other downstream 1515202 20187281 ~ 20193338 (-)
spink4 NA other downstream 1663814 20042763 ~ 20044726 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other downstream 1912018 19766497 ~ 19796522 (-)
LOC120569510 NA other downstream 1943153 19764893 ~ 19765387 (-)
LOC120556502 LOC104944681,LOC103364456 other upstream 618707 22328519 ~ 22335583 (-)
LOC120565362 pik3r6 other upstream 955563 22665375 ~ 22692333 (-)
G6881 usp43,LOC104947996 other upstream 1272113 22981925 ~ 22988500 (-)
G6924 NA other upstream 1378688 23088500 ~ 23164937 (-)
G6943 NA other upstream 1504044 23213856 ~ 23242290 (-)

Expression


Co-expression Network