LOC120556502 (LOC104944681,LOC103364456)


Basic Information

Item Value
gene id LOC120556502
gene name LOC104944681,LOC103364456
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 22328519 ~ 22335583 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU9185
aatttaaagtataaaaagttTATTTCTTCAAACAAAACATCCATGTTTCAACAAGGAAAACACTAAAAGAAGCACCCtgcaaatacataaaataaagtttttcaTCATTGTGAATTTGCCGAACTTATGGAAGGgggaatttaaaataaatgctgaggtgttttttttcctccaaaatACAGCAACACCaagggtcacacacacacgatcttCACTGGAAAGACATTTCAGGCTCATCTTGACTGTTCATGTAGGAGGAGATATCGATCTCCTctggtagctctgctacgttgACCTCAAAGCGGTCTTGGACGTCGTTCAGGGTCTTGGCGTCATCCTCGTCAGACACAAAGGTGACGGCCAGGCCTTTGGTCCCAAACCTGCCAGCACGGGCCACCTGAGGTACACAGAACAAGTTAGGGCTCAAAAACAGGCTCTGCTCAAAAGCAAAACAAGAATGCTACCAATTTTCTATAATCAGGAAAGGGGGCTTAGAATCATGGACAAAGGATAAGTttctttaaattatttctgactAGTATTCATTTCTGAACA
>XM_039796151.1
TGATGTATATGTTCTGTCAGCCAAAAAGTGGACACAGTAGGCCTACAACGTTTGGTAAATGGAGATTAGGTGGGGTTGTGTCTCCTTTTTCCAAAGAACATTGACACGTTGATTCCTACAAACTTAAACAAGTTGGCTCTAGTGCTAAGCGATGACTCAAACCAGAGTCAGCAGGGGACTGGGTACAAACTCTGAGCTGTCTAGAGACTTAAGGCTGACTGGCCAGCAATGACTTGACTTACTGTACAGGCGTAGCCTACTGCAGTGCCTTGTCTGTGAAATAATTCAAAATCAGTCACAAACCCTGGGGAGCCTAGGAGATGATGCAGAATCCAAAATGAATGTTGGGAGAAAAGCTGGGAATAGTGCATTGTGTCACTCTAAATTTGTCAAGAAGGCAAGAAACTTTTCCTGAAGCTGCACTGTGGATCTCTGATGCTGTTTGAACAAGACTCTGCATggagttctttttttatttcttttgttagctgtaggaaaaaaaaaaaaatgttgcatgACTCAGATCATTTGTGTCTTGTCTGGCGATGtgatctccctctctctgctctttCCCTCATCCCTCCAGGTGACTGCTAGCTGCCCAGCAGTGTGTGAGTGCCCTGACGAGCCCCTGGTTTGCCCTCCAGGAGTTAGCACTGTGCCAGATGGATGTGGGTGCTGCAAGGTGTGTGCTGCACAGCTTAACCAGGACTGCAGCCCCACGAGGCCCTGCGACCACCACAAAGGGCTGGAGTGTAATTACGGCAACGATGTGACCATGGCCTGGGGCATCTGTCGAGCAAAATCAGAGGGACGCACATGCGAGTACAACGGCAGGATCTACCAGAATGGCGAGAGCTTCCGTGCCGGCTGTAAACACCAGTGTACCTGCATCGATGGCGCCGTTGGCTGCGCTCCTCTCTGCACCAACAAGCTGCCACCGGCCTCTCCATCCTGCCCCTACCCACGGCTGGTCAGGATACCCGGGCAGTGCTGCTTCAGTGTGGTCTGCCATAAGGGTACCTGGTGGCTGCCACCTAAGCATCagGTGCCTCCACCACAACAACACCTGACCAGACGTCAGCACCAGCCTGAAAATGAGCTGGCCAACGAGCTCGCCGACGCCAAGTCCAGCGGCTGGGAGAGTGAACATGGATACAAACACCTGCCTGTGTGGAACCATCTGAAGGAGAAGAAGTGTCCAGTCCAGACCACTGACTGGTCCCAGTGCTCCCGCAGCTGTGGGATGGGAGTTTCTTCTCGCATCACCAACAAGAACCCTCAGTGCAagctagagagagagacgaggatcTGTACCGTACGGCCATGCCACGGCCTAACAGTCCCAGCCAAGaGAGGGAAAAAGTGCTCCCCAACCCAGAAAGCCCCCGAGCCTATCCGCCTGTCCTACGGAGAATGTGTCAGTGTCCGCCTCTACCGGCCCAACTACTGCGGTGTGTGTGCGGACGGACAGTGCTGCTCGCCACGCCGCACGCGCACTGTACCCGTGAGGTTTGTCTGCCCAGACGGCGAGCGTTTCCAGAGGTCGGCCATGTTCATCCAGTCGTGTAAATGCAGCGATGACTGCGGCCACCTCAACGAAGTGGCCCTCCCTCCACAGCAGTGGATGTACGGAGATACACATCAGTTCATAGACTAGTACTGAggagcatttttattttgttttattatgatGAGGTCGACTTTTTGTTGACGCTTCAAGACTAGGGGccgttttttttctcatctggCTCCAAATGAGGGAAGACCACAGGCACCCACCTGACTGTCCAACCGCAGGGAGGAAGGGCCACCTCTGTTTGATTCATCATAAAGGCAACCCTATTTGTGATATAATTGTGACAGGAGTGGATTGTACACTTGCACGCTCCTAATCAAACAGACGTGGGACTGAAATTAGAGCCCTGAAGCAAACCTGGACTTTTTCACTCTGGACTGACTGCTGGTTCGAGTGTGgaggattttttgtttttttggagaCCCCAGGGCCAGCCTAAGAGGGGAAACCCTACGAGAGCAACACAGCACTTTGTTTAGCACAGAGACTTGGGGAACTATGACAGCAGTGCTTAAGGATCACCTCACCTGCAACAATAGCCTCAAATACTGTGATTTTTGGATGACGCCttatcccacaatgcactgtAGTTACTCAATGACAAGCAAAATAATATTTTGCAGCTTTATCTAGAAAGATGTGGACTTTattaaaaattatataaaatcaGCACAGCATGTTATGTACATCAGCGGAAACTTTGGCATGCTGACATGAATTTTATTCCATTATGACACAGTTATGATAAGGAATGCTATCTGGAACTGACACAAGCATTAAGCTAGGACTGGACCAATTTCTTGTTTGTGCATTAAATGCAGCTTAGAGAAATGTCTTACGCAAACCTGTATTTGAGAATTTTTGGATCACACTGTATTCTgtaaatattttctttatttggatCCATGTTTGTATTGTCACATTAACATATTTCCATggattaagacattacagtgtAGCAGTCATGCATTTTTGTTGGTCCATCTATGAGATAAAACTGGCTGCTGAGCTCAAGGTTCATGCCAGGTTTTATCTCAACATGTAGTTTTAAACTTGGCAGCCAGTTCAAAGTAGCCAAATGTTTGGGAAAACAGCTGTGTAACTATGATACAGCACCCTCTGCTTGTGAGGATAATTAACTGCAATAGtttgtattttatatgatactgtactgtaactgTTTATTCTAACATCTGAAAaacttaaatgtttaaaaacatttaaaatcacaacaaatttaaagtataaaaagttTATTTCTTCAAACAAAACATCCATGTTTCAACAAGGAAAACACTAAAAGAAGCACCCtgcaaatacataaaataaagtttttcaTCATTG
>XM_039796157.1
CggtccaaaaaaataaaagactgaGACTAAGTGTGAAACTAATTACGACTAGCAACCATTCAGTGGATTTTAGCTTGAGGAtatattttatctttatttgtatttttcttaaaCTTGTCATAGGCTAATCATGGCATTTCTGATCTACTTGACTCTACTGACAACAGCCGTCATCACACAGGTGACTGCTAGCTGCCCAGCAGTGTGTGAGTGCCCTGACGAGCCCCTGGTTTGCCCTCCAGGAGTTAGCACTGTGCCAGATGGATGTGGGTGCTGCAAGGTGTGTGCTGCACAGCTTAACCAGGACTGCAGCCCCACGAGGCCCTGCGACCACCACAAAGGGCTGGAGTGTAATTACGGCAACGATGTGACCATGGCCTGGGGCATCTGTCGAGCAAAATCAGAGGGACGCACATGCGAGTACAACGGCAGGATCTACCAGAATGGCGAGAGCTTCCGTGCCGGCTGTAAACACCAGTGTACCTGCATCGATGGCGCCGTTGGCTGCGCTCCTCTCTGCACCAACAAGCTGCCACCGGCCTCTCCATCCTGCCCCTACCCACGGCTGGTCAGGATACCCGGGCAGTGCTGCTTCAGTGTGGTCTGCCATAAGGGTACCTGGTGGCTGCCACCTAAGCATCagGTGCCTCCACCACAACAACACCTGACCAGACGTCAGCACCAGCCTGAAAATGAGCTGGCCAACGAGCTCGCCGACGCCAAGTCCAGCGGCTGGGAGAGTGAACATGGATACAAACACCTGCCTGTGTGGAACCATCTGAAGGAGAAGAAGTGTCCAGTCCAGACCACTGACTGGTCCCAGTGCTCCCGCAGCTGTGGGATGGGAGTTTCTTCTCGCATCACCAACAAGAACCCTCAGTGCAagctagagagagagacgaggatcTGTACCGTACGGCCATGCCACGGCCTAACAGTCCCAGCCAAGaGAGGGAAAAAGTGCTCCCCAACCCAGAAAGCCCCCGAGCCTATCCGCCTGTCCTACGGAGAATGTGTCAGTGTCCGCCTCTACCGGCCCAACTACTGCGGTGTGTGTGCGGACGGACAGTGCTGCTCGCCACGCCGCACGCGCACTGTACCCGTGAGGTTTGTCTGCCCAGACGGCGAGCGTTTCCAGAGGTCGGCCATGTTCATCCAGTCGTGTAAATGCAGCGATGACTGCGGCCACCTCAACGAAGTGGCCCTCCCTCCACAGCAGTGGATGTACGGAGATACACATCAGTTCATAGACTAGTACTGAggagcatttttattttgttttattatgatGAGGTCGACTTTTTGTTGACGCTTCAAGACTAGGGGccgttttttttctcatctggCTCCAAATGAGGGAAGACCACAGGCACCCACCTGACTGTCCAACCGCAGGGAGGAAGGGCCACCTCTGTTTGATTCATCATAAAGGCAACCCTATTTGTGATATAATTGTGACAGGAGTGGATTGTACACTTGCACGCTCCTAATCAAACAGACGTGGGACTGAAATTAGAGCCCTGAAGCAAACCTGGACTTTTTCACTCTGGACTGACTGCTGGTTCGAGTGTGgaggattttttgtttttttggagaCCCCAGGGCCAGCCTAAGAGGGGAAACCCTACGAGAGCAACACAGCACTTTGTTTAGCACAGAGACTTGGGGAACTATGACAGCAGTGCTTAAGGATCACCTCACCTGCAACAATAGCCTCAAATACTGTGATTTTTGGATGACGCCttatcccacaatgcactgtAGTTACTCAATGACAAGCAAAATAATATTTTGCAGCTTTATCTAGAAAGATGTGGACTTTattaaaaattatataaaatcaGCACAGCATGTTATGTACATCAGCGGAAACTTTGGCATGCTGACATGAATTTTATTCCATTATGACACAGTTATGATAAGGAATGCTATCTGGAACTGACACAAGCATTAAGCTAGGACTGGACCAATTTCTTGTTTGTGCATTAAATGCAGCTTAGAGAAATGTCTTACGCAAACCTGTATTTGAGAATTTTTGGATCACACTGTATTCTgtaaatattttctttatttggatCCATGTTTGTATTGTCACATTAACATATTTCCATggattaagacattacagtgtAGCAGTCATGCATTTTTGTTGGTCCATCTATGAGATAAAACTGGCTGCTGAGCTCAAGGTTCATGCCAGGTTTTATCTCAACATGTAGTTTTAAACTTGGCAGCCAGTTCAAAGTAGCCAAATGTTTGGGAAAACAGCTGTGTAACTATGATACAGCACCCTCTGCTTGTGAGGATAATTAACTGCAATAGtttgtattttatatgatactgtactgtaactgTTTATTCTAACATCTGAAAaacttaaatgtttaaaaacatttaaaatcacaacaaatttaaagtataaaaagttTATTTCTTCAAACAAAACATCCATGTTTCAACAAGGAAAACACTAAAAGAAGCACCCtgcaaatacataaaataaagtttttcaTCATTG

Function

NR:

description
PREDICTED: protein CYR61-like

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9185 False 555 lncRNA 0.37 2 22328519 22329372
XM_039796151.1 True 2923 mRNA 0.47 5 22329263 22335172
XM_039796157.1 False 2518 mRNA 0.47 6 22329263 22335583

Neighbor

gene id symbol gene type direction distance location
evi5l evi5l,LOC100697259 coding downstream 7972 22275666 ~ 22320547 (-)
LOC120556520 NA coding downstream 55437 22266418 ~ 22273082 (-)
LOC120556437 mcoln1 coding downstream 89659 22216256 ~ 22238860 (-)
si:ch211-214c7.4 LOC107102761 coding downstream 118789 22182683 ~ 22209730 (-)
pkn1a pkn1,LOC103364445,LOC108242730,LOC107382353,LOC103383564 coding downstream 156845 22115116 ~ 22171674 (-)
LOC120562917 LOC103354903 coding upstream 77017 22412600 ~ 22538510 (-)
LOC120558725 LOC103354901,LOC103383579 coding upstream 284087 22619670 ~ 22634940 (-)
si:dkey-45d16.4 LOC104950130 coding upstream 300301 22635884 ~ 22641744 (-)
LOC120558762 LOC108242699,LOC106536899,LOC103354898,LOC100703987,LOC103383580 coding upstream 318598 22654181 ~ 22665213 (-)
pik3r5 pik3r5 coding upstream 357204 22692787 ~ 22720815 (-)
G6762 ddx39a,LOC103150096 non-coding downstream 3136 22324550 ~ 22325383 (-)
G6764 NA non-coding downstream 62527 22264384 ~ 22265992 (-)
G6731 NA non-coding downstream 236962 22090500 ~ 22091557 (-)
LOC120568056 NA non-coding downstream 287588 22035285 ~ 22040931 (-)
LOC120569580 NA non-coding downstream 289368 22039009 ~ 22039151 (-)
LOC120562974 NA non-coding upstream 265805 22601388 ~ 22603953 (-)
G6834 NA non-coding upstream 315949 22651532 ~ 22653786 (-)
G6879 NA non-coding upstream 589248 22924831 ~ 22933891 (-)
G6880 usp43 non-coding upstream 637299 22972882 ~ 22973326 (-)
G6907 LOC107382332,LOC106515271,LOC102218172,LOC108242722,LOC103383557 non-coding upstream 717736 23053319 ~ 23058150 (-)
G6592 ube2o,LOC106534564 other downstream 618707 21708540 ~ 21709812 (-)
LOC120566957 NA other downstream 759460 21563091 ~ 21569059 (-)
LOC120574674 NA other downstream 2135181 20187281 ~ 20193338 (-)
spink4 NA other downstream 2283793 20042763 ~ 20044726 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other downstream 2531997 19766497 ~ 19796522 (-)
LOC120565362 pik3r6 other upstream 329792 22665375 ~ 22692333 (-)
G6881 usp43,LOC104947996 other upstream 646342 22981925 ~ 22988500 (-)
G6924 NA other upstream 752917 23088500 ~ 23164937 (-)
G6943 NA other upstream 878273 23213856 ~ 23242290 (-)
G7065 NA other upstream 1237122 23572705 ~ 23573049 (-)

Expression


Co-expression Network