G6947 (LOC104947985,LOC103354881)


Basic Information

Item Value
gene id G6947
gene name LOC104947985,LOC103354881
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 23250195 ~ 23253876 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU9441
ATGTGTATTACCCTCTATGGTGCCCCATTTTGTTTTCCTTCCCAAAATCTTCTTTCCGTTCACCTGGTACTCCTGGTCACTGCCCACAACAGCAAAGGGATCATCTCCCGGATTTTGTCATTGATCATCCTGTCATCTGCATCCTCGTCAAACTCTTTCTGAGGGTAAACATCGATTCCATTGGCTCGCAGCTCTTCCCTGATCGTCTGTTTAAAGTAGTCCCTCTCCTCTAGGGTGAGTGTGTCGGCCTTGGCAATGACGGGGACGATGTTGACCACTTTACTGAGACGTCTCATGAACTCCACATCCAGAGGCCTCAGACTGGAGGAAGATAGAGATGACAGGACAACTTCATTTCATGCATAAATGTCTGTAACTATGTGTGGTTGTTATTTGGAAACTCCAAATTAAGGCATCGTggtctaaaacaaaaaaaggagcaACAACTCACAACACTGCAGATTTGTGCTCTAAACCTTTAACATATTCATTTTTTCCCACTGTGGCACAAAAACAAATCTACT

Function

NR:

description
PREDICTED: septin-9-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9441 True 524 lncRNA 0.39 3 23250195 23253876

Neighbor

gene id symbol gene type direction distance location
LOC120561952 NA coding downstream 76578 23170807 ~ 23173617 (-)
mchr1a LOC103354888,LOC104947992,LOC102295449,LOC102791021 coding downstream 252215 22993868 ~ 22997980 (-)
stx8 stx8 coding downstream 415731 22785495 ~ 22834464 (-)
pik3r5 pik3r5 coding downstream 529380 22692787 ~ 22720815 (-)
LOC120558762 LOC108242699,LOC106536899,LOC103354898,LOC100703987,LOC103383580 coding downstream 584982 22654181 ~ 22665213 (-)
LOC120546964 NA coding upstream 166404 23420280 ~ 23431271 (-)
znf207b znf207,LOC104947983,LOC103374438 coding upstream 177061 23430937 ~ 23438268 (-)
rhbdl3 rhbdl3,LOC102785192 coding upstream 184955 23438831 ~ 23501859 (-)
rhot1b LOC103373013,LOC101484650,LOC100702459,LOC102784702,LOC102202739 coding upstream 254909 23508785 ~ 23524162 (-)
LOC120562252 adap2,LOC102784227 coding upstream 271456 23525332 ~ 23532042 (-)
LOC120556418 NA non-coding downstream 114420 23130454 ~ 23135775 (-)
G6907 LOC107382332,LOC106515271,LOC102218172,LOC108242722,LOC103383557 non-coding downstream 192045 23053319 ~ 23058150 (-)
G6880 usp43 non-coding downstream 276869 22972882 ~ 22973326 (-)
G6879 NA non-coding downstream 316304 22924831 ~ 22933891 (-)
G6834 NA non-coding downstream 596409 22651532 ~ 22653786 (-)
G6986 NA non-coding upstream 154401 23408277 ~ 23409202 (-)
G6993 NA non-coding upstream 173636 23427512 ~ 23429145 (-)
G6995 NA non-coding upstream 254398 23508274 ~ 23508560 (-)
LOC120555765 NA non-coding upstream 312884 23566760 ~ 23571034 (-)
G7067 NA non-coding upstream 323052 23576928 ~ 23577129 (-)
G6943 NA other downstream 7905 23213856 ~ 23242290 (-)
G6924 NA other downstream 85258 23088500 ~ 23164937 (-)
G6881 usp43,LOC104947996 other downstream 261695 22981925 ~ 22988500 (-)
LOC120565362 pik3r6 other downstream 557862 22665375 ~ 22692333 (-)
LOC120556502 LOC104944681,LOC103364456 other downstream 914612 22328519 ~ 22335583 (-)
G7065 NA other upstream 318829 23572705 ~ 23573049 (-)
LOC120557242 NA other upstream 457951 23711827 ~ 23720750 (-)
si:ch211-207j7.2 NA other upstream 480488 23734364 ~ 23746031 (-)
G7071 NA other upstream 498150 23752026 ~ 23768841 (-)
palm3 NA other upstream 518980 23772856 ~ 23811021 (-)

Expression


Co-expression Network