G690


Basic Information

Item Value
gene id G690
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 2170948 ~ 2172470 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU949
gtttattatttttaaagaaatggcagagcagattccgAAAACAAATCCATTGTGGCaggatttacatttttataatgtaaattgagggagaaaaagcagtatcggctccaaatatcggcTCAAGAAAATTGGCAGCTGTATCGgtcatcggctaaggctgatggtatcggcactaaaaaatccatatcggtcgatccctagttTTAAGGGGTGTATATACTTGCGGTAGCTGGGGGGAAAGCTTAGAAAAAGTTGAataaagcaagaaaaaaaatattaaagacacatttgaaaaaaagtgttttcagttttcacccgggaggacaacaggagggttaaaggcagggttggtgaTGTTGGAAAGCTAGTAAGATGTGAAGGAAGCATCACATCGGGGCTCCGCCCGCACATGGACGTGCACGAGCGCCGCTGCTTCAGGGCAGAGCGGAGAAACAACTTCTCGTCTCAGCGGCAACTTTCCTGAGTTTCTCCTCCGTTCTGCAGCTGACCTGCAGTAACTCTAGACTGTGGCTCGTACAGTGGagaggcagtgattggtgggcaGATCACGGATCTTTTTCactcctttttcagagcccagAAGTTATTTATGGACCTttatcacagcagacatgttgacttgtcatagtaggaaaagcacagctgagattgataaccttaacgatggctcagttccatcaagtgtcccagtaagatatttcagtgagtcagcatgcacaataccaggacctctcctaagtggaatggagccatcagtaatggtttaataccaggacctctcctaagtgaatgcagccatcagtaatggtttaataccagggtctctcctaagtggaatgcagccatcagtaatggtttaataccaggacctctcctaagtggaatgcagccatcagtaatggtttaatgccagggtctctcctaagtggaatgcagccatcagtaatggtttaataccagggtctctcctaagtggaatgcagccatcagtaatggtttaataccaggacctctcctaagtggaatgcagccatcagtaatggtttaataccaggacctctcctaagtggaatgcagccatcagtaatggtttaatgccagggtctctcctaagtggaatgcagccacagtaatggtttaataccaggacgtctcctaagtggaatgcagccatcattaatagtttaataccaggacctctcctaagtggaatgcagccatcattaatagtttaataccaggacctctcctaagtgaatgcagccatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU949 True 1289 lncRNA 0.42 2 2170948 2172470

Neighbor

gene id symbol gene type direction distance location
LOC120566013 NA coding upstream 96661 2070145 ~ 2074287 (+)
LOC120561186 sptbn1,LOC100697102 coding upstream 109902 1995736 ~ 2061046 (+)
polr3f polr3f,LOC102798306 coding upstream 184925 1978320 ~ 1986023 (+)
LOC120566732 NA coding upstream 589252 1580314 ~ 1581696 (+)
LOC120566800 NA coding upstream 724623 1439840 ~ 1446325 (+)
LOC120561330 NA coding downstream 25504 2197974 ~ 2201400 (+)
LOC120566037 NA coding downstream 30057 2202527 ~ 2204900 (+)
LOC120566049 NA coding downstream 39524 2211994 ~ 2219853 (+)
mtif2 mtif2 coding downstream 55693 2228163 ~ 2246934 (+)
mrps28 mrps28 coding downstream 94385 2266855 ~ 2267623 (+)
G684 NA non-coding upstream 40164 2130256 ~ 2130784 (+)
G676 NA non-coding upstream 41532 2082828 ~ 2129416 (+)
G675 NA non-coding upstream 64211 2067832 ~ 2106737 (+)
G621 NA non-coding upstream 231896 1938774 ~ 1939052 (+)
G388 NA non-coding upstream 332969 1731180 ~ 1837979 (+)
G701 NA non-coding downstream 79576 2252046 ~ 2254334 (+)
G720 NA non-coding downstream 152646 2325116 ~ 2380150 (+)
G725 NA non-coding downstream 174698 2347168 ~ 2361839 (+)
G724 NA non-coding downstream 182464 2354934 ~ 2361333 (+)
G731 NA non-coding downstream 212685 2385155 ~ 2385544 (+)
LOC120566000 NA other upstream 203693 1946145 ~ 1967255 (+)
G369 NA other upstream 251124 1582038 ~ 1919824 (+)
G363 LOC104946033,LOC104961227 other upstream 291402 1593822 ~ 1879546 (+)
LOC120566853 snrpb2,LOC102212107,LOC102301910,LOC101474810 other upstream 334488 1746571 ~ 1836460 (+)
G355 NA other upstream 634251 1536215 ~ 1536697 (+)
G714 LOC103375176,LOC105920176,LOC100706186,LOC101468385 other downstream 134815 2307285 ~ 2346048 (+)
LOC120566146 LOC107082675,LOC108251143,LOC103383281 other downstream 386406 2558876 ~ 2570454 (+)
G879 NA other downstream 453773 2626243 ~ 2700975 (+)
LOC120567073 sos1 other downstream 822559 2995029 ~ 3080190 (+)
LOC120567079 NA other downstream 895928 3068398 ~ 3071473 (+)

Expression


Co-expression Network