G701


Basic Information

Item Value
gene id G701
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 2252046 ~ 2254334 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU962
CTGCTGTTTATTCTTCagaaacatttttaataaaaaagatcAAACTTGATATCTGACAGTTCACCTTTTGGGAACAGAAGTCCCGTACAGACAGAAATATCAAACAATATTTGGAAAATGCTGCCTTCTAATTGGACGAATTCACAAACCAGCTAAAAGCCTGATTTGTTGATAATGTTTAGTTACAGTCGACTAAATATGACACGCGCTGCACTGTCTCAGCGGGGGAGAAGAATCCAGAAAGGGTCCGATGAGAAACAAAGACTTCAGCGTGTTCATGAGTTCACTTCCTGTTGGTCTTGGCGGTTTTGGCGAGCAGGGCCGGGTCGATCTGATCTGGAGTCAGTCCTCTGACAGAGAAGAGGCGCGCGGCGCGCTCAGTCAGCGTTCCCCCGCACTTTAACCCACGAGACATGAGTTCCTCCTTCAGGACGCTGAGACCCAGAGACTCCAGCTGCTCCACCGAGGACAGAGAGGACACGTCCACAGCAGGGCCACCCTGGACGCAAACACACATCAGTCATTACtggacactaacacacatctAGTCATTACtggacactaacacacatctATCATTACtggacactaacacacatcAGTCATTACtggacactaacacacatctAGTCATTACtggacactaacacacatctAGTTATTACtggacactaacacacatcAGTTATTACtggacactaacacacatctAGTTATTACtggacactaacacacatcCAGTTATTATtggacactaacacacatcAGTTATTATtggacactaacacacatctAGTCATTACtggacactaacacacatcAGTTATTACtggacactaacacacatcAGTTATTACTGGACGgctattactgatggctgcattcacttaggagaggtcctggtattgtgcatgctgactcactgaaatatctcactgggacacttgatggaactgagccatcgttaaggttattaatgtcagctgtgcttttcctaatatgacaagtcaacatgtctgctgtgaagaagGTCCATAGTatgtgtagaaatatattgggttcAGAACAAGAATgtgctgtagcctgggatggcctcgctgtctcctcctgtctggcatgtgtaagataagacgggttcaaatttagtggagcaagagtgctcctcatttgtttaataaacaattggaacagaatgcacctaatgaaatctcttaaaggaacagacaatctctagcgcgcaacttctctatcttctcggagacagaaagtct
>TU963
CTGCTGTTTATTCTTCagaaacatttttaataaaaaagatcAAACTTGATATCTGACAGTTCACCTTTTGGGAACAGAAGTCCCGTACAGACAGAAATATCAAACAATATTTGGAAAATGCTGCCTTCTAATTGGACGAATTCACAAACCAGCTAAAAGCCTGATTTGTTGATAATGTTTAGTTACAGTCGACTAAATATGACACGCGCTGCACTGTCTCAGCGGGGGAGAAGAATCCAGAAAGGGTCCGATGAGAAACAAAGACTTCAGCGTGTTCATGAGTTCACTTCCTGTTGGTCTTGGCGGTTTTGGCGAGCAGGGCCGGGTCGATCTGATCTGGAGTCAGTCCTCTGACAGAGAAGAGGCGCGCGGCGCGCTCAGTCAGCGTTCCCCCGCACTTTAACCCACGAGACATGAGTTCCTCCTTCAGGACGCTGAGACCCAGAGACTCCAGCTGCTCCACCGAGGACAGAGAGGACACGTCCACAGCAGGGCCACCCTGGACGCAAACACACATCAGTCATTACtggacactaacacacatctAGTCATTACtggacactaacacacatctAGTCATTACtggacactaacacacatctATTATTACtggacactaacacacatcAGTTATTACtggacactaacacacatctAGTCATTACtggacactaacacacatcAGTTATTACtggacactaacacacatcAGTTATTATtggacactaacacacatctAGTCATTACtggacactaacacacatcAGTTATTACtggacactaacacacatcAGTTATTACTGGACGgctattactgatggctgcattcacttaggagaggtcctggtattgtgcatgctgactcactgaaatatctcactgggacacttgatggaactgagccatcgttaaggttattaatgtcagctgtgcttttcctaatatgacaagtcaacatgtctgctgtgaagaagGTCCATAGTatgtgtagaaatatattgggttcAGAACAAGAATgtgctgtagcctgggatggcctcgctgtctcctcctgtctggcatgtgtaagataagacgggttcaaatttagtggagcaagagtgctcctcatttgtttaataaacaattggaacagaatgcacctaatgaaatctcttaaaggaacagacaatctctagcgcgcaacttctctatcttctcggagacagaaagtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU962 True 1271 lncRNA 0.43 4 2252046 2254334
TU963 False 1215 lncRNA 0.37 3 2252046 2254334

Neighbor

gene id symbol gene type direction distance location
mtif2 mtif2 coding upstream 5112 2228163 ~ 2246934 (+)
LOC120566049 NA coding upstream 32193 2211994 ~ 2219853 (+)
LOC120566037 NA coding upstream 47146 2202527 ~ 2204900 (+)
LOC120561330 NA coding upstream 50646 2197974 ~ 2201400 (+)
LOC120561285 NA coding upstream 66470 2137077 ~ 2185576 (+)
mrps28 mrps28 coding downstream 12521 2266855 ~ 2267623 (+)
LOC120561353 LOC102083160 coding downstream 108398 2362732 ~ 2394287 (+)
LOC120566159 NA coding downstream 318646 2572980 ~ 2584262 (+)
LOC120561808 srf,LOC103372093 coding downstream 604170 2858504 ~ 2881120 (+)
eif4a3 eif4a3 coding downstream 628589 2882923 ~ 2891005 (+)
G690 NA non-coding upstream 79576 2170948 ~ 2172470 (+)
G684 NA non-coding upstream 121262 2130256 ~ 2130784 (+)
G676 NA non-coding upstream 122630 2082828 ~ 2129416 (+)
G675 NA non-coding upstream 145309 2067832 ~ 2106737 (+)
G621 NA non-coding upstream 312994 1938774 ~ 1939052 (+)
G720 NA non-coding downstream 70782 2325116 ~ 2380150 (+)
G725 NA non-coding downstream 92834 2347168 ~ 2361839 (+)
G724 NA non-coding downstream 100600 2354934 ~ 2361333 (+)
G731 NA non-coding downstream 130821 2385155 ~ 2385544 (+)
G857 NA non-coding downstream 316958 2571292 ~ 2571500 (+)
LOC120566000 NA other upstream 284791 1946145 ~ 1967255 (+)
G369 NA other upstream 332222 1582038 ~ 1919824 (+)
G363 LOC104946033,LOC104961227 other upstream 372500 1593822 ~ 1879546 (+)
LOC120566853 snrpb2,LOC102212107,LOC102301910,LOC101474810 other upstream 415586 1746571 ~ 1836460 (+)
G355 NA other upstream 715349 1536215 ~ 1536697 (+)
G714 LOC103375176,LOC105920176,LOC100706186,LOC101468385 other downstream 52951 2307285 ~ 2346048 (+)
LOC120566146 LOC107082675,LOC108251143,LOC103383281 other downstream 304542 2558876 ~ 2570454 (+)
G879 NA other downstream 371909 2626243 ~ 2700975 (+)
LOC120567073 sos1 other downstream 740695 2995029 ~ 3080190 (+)
LOC120567079 NA other downstream 814064 3068398 ~ 3071473 (+)

Expression


Co-expression Network